Targeting of protein ubiquitination by BTB-Cullin 3-Roc1 ubiquitin ligases

Manabu Furukawa1, Yizhou Joseph He, Christoph Borchers

  • 1Lineberger Comprehensive Cancer Center, Department of Biochemistry and Biophysics, and Program in Molecular Biology and Biotechnology, University of North Carolina at Chapel Hill, NC 27599-7295, USA.

Nature Cell Biology
|October 7, 2003
PubMed

Insights

The study reveals Cul3 directly binds BTB domains, forming novel BCR3 ubiquitin ligases. This finding expands our understanding of protein regulation via the ubiquitin pathway.

Area of Science:

  • Biochemistry
  • Molecular Biology
  • Cell Biology

Background:

  • Protein ubiquitination is a key cellular process regulated by the ubiquitin pathway.
  • Cullin proteins, Roc1, and adaptor proteins form E3 ubiquitin ligase complexes.
  • Specific cullins (Cul1, Cul7) interact with Skp1 and F-box proteins to form SCF-Roc1 ligases.

Purpose of the Study:

  • To investigate the binding interactions of Cul3 within the cullin family.
  • To identify novel E3 ubiquitin ligase complexes involving Cul3.
  • To elucidate the role of Cul3 in protein ubiquitination and degradation.

Main Methods:

  • Direct binding assays to analyze Cul3-BTB domain interactions.
  • In vitro ubiquitination assays using Cul3 and its substrates.
  • Analysis of Caenorhabditis elegans MEI-1 ubiquitination and degradation.

Main Results:

  • Cul3 directly binds to multiple BTB domains via its conserved amino-terminal domain.
  • Cul3, in conjunction with BTB protein MEL-26, promotes the ubiquitination of Caenorhabditis elegans MEI-1.
  • MEI-1 degradation is dependent on the function of both Cul3 and MEL-26.

Conclusions:

  • Cul3 forms E3 ubiquitin ligases by binding to BTB domains.
  • A diverse family of BCR3 (BTB-Cul3-Roc1) E3 ubiquitin ligases likely exists.
  • This discovery provides new insights into the regulation of protein degradation through the ubiquitin-proteasome system.

Related Concept Videos

Regulated Protein Degradation02:58

Regulated Protein Degradation

It is vital to regulate the activity of enzymatic as well as non-enzymatic proteins inside the cell. This can be achieved either through creating a balance between their rate of synthesis and degradation or regulating the intrinsic activity of the protein. Both these regulation mechanisms play an essential role in the normal functioning of cells.
Protein degradation plays two important roles in the cells. It helps to protect cells from misfolded or damaged proteins before they lead to a...
The Proteasome01:13

The Proteasome

Eukaryotic cells can degrade proteins through several pathways. One of the most important among these is the ubiquitin-proteasome pathway. It helps the cell eliminate the misfolded, damaged, or unwarranted cytoplasmic proteins in a highly specific manner.
In this pathway, the target proteins are first tagged with small proteins called ubiquitin. This involves participation of a series of enzymes including— E1 (ubiquitin-activating enzyme), E2 (ubiquitin-conjugating enzyme), and E3 (ubiquitin...
The Proteasome02:18

The Proteasome

Eukaryotic cells can degrade proteins through several pathways. One of the most important amongst these is the ubiquitin-proteasome pathway. It helps the cell eliminate the misfolded, damaged, or unwarranted cytoplasmic proteins in a highly specific manner.
In this pathway, the target proteins are first tagged with small proteins called ubiquitin. A series of enzymes carry out the ubiquitination of the target proteins - E1 (ubiquitin-activating enzyme), E2 (ubiquitin-conjugating enzyme), and E3...
Covalently Linked Protein Regulators02:04

Covalently Linked Protein Regulators

Proteins can undergo many types of post-translational modifications, often in response to changes in their environment. These modifications play an important role in the function and stability of these proteins. Covalently linked molecules include functional groups, such as methyl, acetyl, and phosphate groups, and also small proteins, such as ubiquitin. There are around 200 different types of covalent regulators that have been identified.
These groups modify specific amino acids in a protein.
Receptor Downregulation in MVBs01:15

Receptor Downregulation in MVBs

Multivesicular bodies (MVBs) are mature endosomes that sort ubiquitinated proteins and then fuse with lysosomes to degrade the sorted proteins. Epidermal growth factor (EGF) and its receptor (EGFR) form a complex that can be internalized through endocytosis, sorted into an MVB, and later degraded.
The EGFR can initiate signaling pathways that  lead to cell proliferation, migration, and differentiation. Overexpression of EGFR  stimulates cells to proliferate. Excessive  EGFR activation may...
PI3K/mTOR/AKT Signaling Pathway01:22

PI3K/mTOR/AKT Signaling Pathway

The mammalian target of rapamycin  (mTOR) is a serine/threonine kinase that regulates growth, proliferation, and cell survival in response to hormones, growth factors, or nutrient availability. This kinase exists in two structurally and functionally distinct forms: mTOR complex 1  (mTORC1) and mTOR complex 2  (mTORC2). The first form (mTORC1) is composed of a rapamycin-sensitive Raptor and proline-rich Akt substrate, PRAS40. In contrast,  mTORC2 consists of a rapamycin-insensitive companion...