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Updated: Aug 30, 2026

Proofreading and DNA Repair Assay Using Single Nucleotide Extension and MALDI-TOF Mass Spectrometry Analysis
Published on: June 19, 2018
Remarkable infidelity of polymerase gammaA associated with mutations in POLG1 exonuclease domain
R Del Bo1, A Bordoni, M Sciacco
1Centro Dino Ferrari, Dipartimento di Scienze Neurologiche, Università degli Studi di Milano, I.R.C.C.S. Ospedale Maggiore Policlinico, Milan. neurogene@policlinico.mi.it
Objective:
To better understand the still unknown pathologic mechanism involved in the accumulation of multiple mtDNA deletions in stable tissues.
Methods:
A large-scale screening of mtDNA molecules from skeletal muscle was performed in 14 patients with progressive external ophthalmoplegia (PEO) and 2 patients with mitochondrial neurogastrointestinal encephalomyopathy carrying mutations on ANT1, C10ORF2 or POLG1, and TP genes.
Results:
Patients with at least one mutation in the exonuclease domain of POLG1 showed the highest frequency of individually rare point mutations only in the mtDNA control region; in addition, high levels, in terms of frequency and heteroplasmy, of recurrent mutations (A189G, T408A, and T414G) and alterations affecting the (HT)D310 region were detectable in many of the patients. Two homozygous POLG1 mutations, within the exonuclease domain, were able to induce an increased mutational burden also in fibroblasts from patients with PEO.
Conclusions:
Specific POLG1 mutations directly affect the integrity of the mtDNA by reducing its proof-reading exonuclease activity, resulting in the accumulation of heteroplasmic levels of both randomly rare and recurrent point mutations in the skeletal muscle tissue and fibroblasts.
Insights
Specific POLG1 mutations impair mitochondrial DNA (mtDNA) integrity, leading to the accumulation of mutations in stable tissues like skeletal muscle. This finding sheds light on the mechanisms behind mtDNA deletion disorders.
Area of Science:
- Mitochondrial genetics
- Molecular biology
- Human genetics
Background:
- Accumulation of multiple mitochondrial DNA (mtDNA) deletions in stable tissues is a poorly understood pathological mechanism.
- Progressive external ophthalmoplegia (PEO) and mitochondrial neurogastrointestinal encephalomyopathy are debilitating conditions linked to mtDNA instability.
Purpose of the Study:
- To elucidate the pathological mechanisms underlying the accumulation of multiple mtDNA deletions in stable tissues.
- To investigate the role of specific gene mutations in mtDNA integrity.
Main Methods:
- Large-scale screening of mtDNA molecules from skeletal muscle in patients with PEO and mitochondrial neurogastrointestinal encephalomyopathy.
- Analysis of mutations in ANT1, C10ORF2, POLG1, and TP genes.
- Assessment of mtDNA mutational burden in fibroblasts from patients with PEO.
Main Results:
- Mutations in the exonuclease domain of POLG1 correlated with a higher frequency of rare point mutations in the mtDNA control region.
- Recurrent mutations (A189G, T408A, T414G) and alterations in the (HT)D310 region were frequently detected in patients.
- Homozygous POLG1 mutations in the exonuclease domain increased the mutational burden in patient fibroblasts.
Conclusions:
- Specific POLG1 mutations compromise mtDNA integrity by reducing proof-reading exonuclease activity.
- This reduction in activity leads to the accumulation of heteroplasmic levels of both rare and recurrent mtDNA point mutations.
- The findings implicate POLG1 mutations as a direct cause of mtDNA instability in skeletal muscle and fibroblasts.
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