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Multiomics Analysis of TMEM200A as a Pan-Cancer Biomarker
Published on: September 15, 2023
c-MET mutational analysis in small cell lung cancer: novel juxtamembrane domain mutations regulating cytoskeletal
Patrick C Ma1, Takashi Kijima, Gautam Maulik
1Department of Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA 02115, USA.
Abstract:
Small cell lung cancer (SCLC) is an aggressive cancer, and most patients present with cancer already spread beyond the lung. The receptor tyrosine kinase (RTK) c-MET has been implicated in various solid tumors, including SCLC, and is involved in mediating tumorigenesis, cell motility, scattering, invasion and metastasis. Mutations of c-Met have been described in renal papillary carcinoma and gastrointestinal cancers including hepatocellular carcinoma. The sequence of c-MET was examined for possible mutations in the 10 SCLC cell lines and 32 paired-SCLC/normal tissues. Novel c-MET alterations were identified among 3 of 10 separate SCLC cell lines and in 4 of 32 SCLC tumor tissue samples. These include two different c-MET missense mutations in the juxtamembrane (JM) domain (R988C found in NCI-H69 and H249 cell lines; and T1010I in SCLC tumor sample T31). Also, there are one Sema domain missense mutation (E168D in SCLC tumor sample T5), two-base-pair insertional mutations (IVS13- (52-53)insCT in both SCLC tumor samples T26 and T27) within the pre-JM intron 13, as well as an alternative transcript involving exon 10 (H128 cell line). c-MET receptors are expressed at various levels among the 10 SCLC cell lines studied (high expression: H69, H345, H510, and H526; medium-expression: H128 and H146; and low/no-expression: H82, H209, H249, and H446). The level of c-MET expression does not have any apparent correlation with presence or absence of mutations of c-MET in the cell lines. We show that the two identified JM mutations (R988C and T1010I), when introduced into the interleukin-3 (IL-3)-dependent BaF3 cell line, regulated cell proliferation resulting in a small but significant growth factor independence. When introduced into a SCLC cell line (H446, with minimal endogenous wild-type c-MET expression), the JM mutations also regulated cell morphology and adhesion, as well as causing enhanced tumorigenicity by both increases in focus-formation and soft-agar colony-formation assays. Both of the JM mutations also increased cell motility and migration evident in wound healing assay and time-lapse video-microscopy speed analysis. The JM mutations also altered the c-MET RTK signaling, resulting in preferentially increased constitutive tyrosine phosphorylation of various cellular proteins, including the key focal adhesion protein paxillin on tyrosine residue Y31 (first CRKL-binding site), correlating with increased motility. These results suggest a novel and unique role of the JM domain in c-MET signaling in SCLC with significant implications in cytoskeletal functions and metastatic potential. The novel JM gain-of-function somatic mutations described are the first to be reported in SCLC, and may be associated with a more aggressive phenotype. It would now be useful to study the inhibition of c-MET as a therapeutic target against SCLC.
Insights
Novel mutations in the c-MET receptor tyrosine kinase (RTK) juxtamembrane domain were identified in small cell lung cancer (SCLC). These mutations promote cell growth, migration, and tumorigenicity, suggesting c-MET as a potential therapeutic target for aggressive SCLC.
Area of Science:
- Oncology
- Molecular Biology
- Cancer Genetics
Background:
- Small cell lung cancer (SCLC) is an aggressive malignancy with a poor prognosis, often presenting with metastatic disease.
- The c-MET receptor tyrosine kinase (RTK) plays a role in tumorigenesis, invasion, and metastasis in various cancers, including SCLC.
- Previous studies have identified c-MET mutations in other cancer types, but their role in SCLC remained largely unexplored.
Purpose of the Study:
- To investigate the presence and functional significance of c-MET mutations in SCLC.
- To identify novel c-MET alterations in SCLC cell lines and patient tissues.
- To explore the impact of identified c-MET mutations on SCLC cell behavior and signaling pathways.
Main Methods:
- Sequencing of the c-MET gene in 10 SCLC cell lines and 32 paired SCLC/normal tissue samples.
- Introduction of identified c-MET mutations into BaF3 and SCLC cell lines to assess functional effects.
- Analysis of cell proliferation, morphology, adhesion, tumorigenicity (focus-formation, soft-agar assays), motility, and migration.
- Investigation of c-MET RTK signaling pathway alterations, including tyrosine phosphorylation of paxillin.
Main Results:
- Novel c-MET alterations were found in 3 of 10 SCLC cell lines and 4 of 32 SCLC tumor tissues.
- Two juxtamembrane (JM) domain missense mutations (R988C and T1010I) were identified and functionally characterized.
- These JM mutations conferred growth factor independence, enhanced tumorigenicity, increased cell motility and migration, and altered c-MET signaling.
- Increased constitutive tyrosine phosphorylation of paxillin was observed, correlating with enhanced cell motility.
Conclusions:
- Novel gain-of-function somatic mutations in the c-MET JM domain are reported for the first time in SCLC.
- These mutations are associated with increased SCLC cell proliferation, migration, and metastatic potential.
- The findings highlight a significant role for c-MET signaling in SCLC pathogenesis and suggest c-MET inhibition as a potential therapeutic strategy.
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