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Published on: May 12, 2023

Novel mutations in the PEX12 gene of patients with a peroxisome biogenesis disorder

Jeannette Gootjes1, Frank Schmohl, Hans R Waterham

  • 1Department of Clinical Chemistry, Academic Medical Center, University of Amsterdam, The Netherlands.

Insights

Peroxisome biogenesis disorders (PBDs) linked to PEX12 gene mutations show varied severity. Novel PEX12 mutations correlate with specific PBD phenotypes and biochemical markers in patients.

Area of Science:

  • Genetics
  • Molecular Biology
  • Biochemistry

Background:

  • Peroxisome biogenesis disorders (PBDs) are a group of genetic diseases with diverse clinical presentations.
  • Zellweger syndrome (ZS), neonatal adrenoleukodystrophy (NALD), and infantile Refsum disease (IRD) are key PBD variants.
  • Defects in at least 11 genes cause PBDs, impacting peroxisome function.

Purpose of the Study:

  • To investigate the genetic basis of PBDs in complementation group 3 (CG3) patients.
  • To identify novel mutations in the PEX12 gene and correlate them with clinical and biochemical phenotypes.
  • To understand the functional impact of PEX12 mutations on peroxisomal protein import.

Main Methods:

  • Genetic analysis of the PEX12 gene in five CG3 patients.
  • Sequence analysis to identify mutations in PEX12.
  • Biochemical assays in patient fibroblasts to measure DHAPAT activity and beta-oxidation of very long-chain fatty acids and pristanic acid.

Main Results:

  • Five distinct PEX12 mutations were identified in five CG3 patients, with four being novel.
  • Mutations leading to truncated PEX12 protein lacking the zinc-binding domain were associated with severe phenotypes (ZS/NALD).
  • A patient with a milder phenotype (IRD) possessed PEX12 alleles encoding a functional zinc-binding domain.
  • Genotypes correlated well with biochemical markers (DHAPAT activity, C26:0 and pristanic acid beta-oxidation) and clinical outcomes.

Conclusions:

  • PEX12 mutations are a significant cause of PBDs in CG3.
  • The location and nature of PEX12 mutations, particularly the presence of the zinc-binding domain, determine disease severity.
  • Genotype-phenotype correlations in PEX12-related PBDs are strong, aiding in diagnosis and prognosis.

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