Related Experiment Video
Updated: Aug 30, 2026

Rapid Analysis of Circadian Phenotypes in Arabidopsis Protoplasts Transfected with a Luminescent Clock Reporter
Published on: September 17, 2016
A type-1 phosphoprotein phosphatase from a dinoflagellate as a possible component of the circadian mechanism
James C Comolli1, Thomas Fagan, J Woodland Hastings
1Department of Molecular and Cellular Biology, Harvard University, 16 Divinity Avenue, Cambridge, MA 02138, USA.
Abstract:
Indicative of the importance of protein phosphorylation in the core circadian clock mechanism, chronically applied inhibitors of both protein kinases and phosphoprotein phosphatases have significant effects on the period, phase, and light-dependent regulation of circadian rhythms in the dinoflagellate Lingulodinium polyedrum. This study was aimed at identifying the presence of the affected phosphatase(s). Dephosphorylation of a PP1/PP2A-specific substrate by L. polyedrum extracts was inhibited by okadaic acid only at concentrations greater than 100 nM, as in vivo, by mammalian inhibitor-2 (I-2), and by an endogenous inhibitor with properties similar to I-2, indicating that a type-1 protein phosphatase (PP1) was predominant. A cDNA encoding a highly conserved PP1 was isolated, the 1st such signaling molecule identified in dinoflagellates. Antisera specific for this type of phosphatase recognized a 34 kDa protein in L. polyedrum extract, this being the same size as the PP1 encoded by the isolated cDNA. These findings are consistent with the suggestion that the L. polyedrum PP1 may be a part of the clock mechanism in this species.
Insights
Researchers identified a type-1 protein phosphatase (PP1) in Lingulodinium polyedrum, a key component likely involved in regulating circadian rhythms. This discovery advances our understanding of the dinoflagellate
Area of Science:
- * Molecular Biology
- * Chronobiology
- * Marine Biology
Background:
- * Protein phosphorylation is crucial for circadian clock mechanisms.
- * Circadian rhythms in the dinoflagellate Lingulodinium polyedrum are affected by kinase and phosphatase inhibitors.
- * The specific phosphatases involved in L. polyedrum's circadian clock were previously unidentified.
Purpose of the Study:
- * To identify the protein phosphatase(s) involved in the circadian clock of Lingulodinium polyedrum.
- * To investigate the presence and characteristics of phosphatases in L. polyedrum extracts.
- * To isolate and characterize the gene encoding the identified phosphatase.
Main Methods:
- * Enzyme assays using a PP1/PP2A-specific substrate with L. polyedrum extracts.
- * Inhibition studies using okadaic acid and mammalian inhibitor-2 (I-2).
- * Isolation of a cDNA encoding a conserved protein phosphatase type 1 (PP1).
- * Western blot analysis using antisera specific to the identified PP1.
Main Results:
- * L. polyedrum extracts showed predominant type-1 protein phosphatase (PP1) activity, indicated by inhibition patterns similar to mammalian I-2.
- * Okadaic acid only inhibited phosphatase activity at high concentrations (>100 nM).
- * A cDNA encoding a highly conserved PP1 was isolated from L. polyedrum.
- * Western blot confirmed a 34 kDa protein in extracts, matching the size of the encoded PP1.
Conclusions:
- * A type-1 protein phosphatase (PP1) is the predominant phosphatase in Lingulodinium polyedrum.
- * The identified L. polyedrum PP1 is highly conserved and likely plays a role in the dinoflagellate's circadian clock mechanism.
- * This is the first signaling molecule of its kind identified in dinoflagellates.
Related Concept Videos
Circadian Rhythms and Gene Regulation
Protein Kinases and Phosphatases
Protein kinases
Many proteins in the cell are regulated by phosphorylation, the addition of a phosphate group. A family of enzymes called kinases...
Calmodulin-dependent Signaling
The Ca2+-CaM complex does not have enzymatic activity by itself. Instead, the complex binds downstream target proteins, including membrane proteins or enzymes,...
Biological Clocks and Seasonal Responses
Phosphoinositides and PIPs
Different phosphoinositides are synthesized and recruited on the cytosolic face of the plasma membrane. The localization of specific phosphoinositides concentrated in separate membrane...
Phosphorylation
During phosphorylation, protein kinases transfer the terminal phosphate group of ATP to specific amino acid side chains of substrate proteins. Serine, threonine, and tyrosine are the most commonly...
