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GARBAN: genomic analysis and rapid biological annotation of cDNA microarray and proteomic data
Luis A Martínez-Cruz1, Angel Rubio, María L Martínez-Chantar
1Department of Internal Medicine, Unit of Proteomics, Genomics and Bioinformatics, University of Navarra, Pamplona-31008, Spain.
Summary:
Genomic Analysis and Rapid Biological ANnotation (GARBAN) is a new tool that provides an integrated framework to analyze simultaneously and compare multiple data sets derived from microarray or proteomic experiments. It carries out automated classifications of genes or proteins according to the criteria of the Gene Ontology Consortium at a level of depth defined by the user. Additionally, it performs clustering analysis of all sets based on functional categories or on differential expression levels. GARBAN also provides graphical representations of the biological pathways in which all the genes/proteins participate.
Availability:
http://garban.tecnun.es.