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Published on: April 21, 2023
Functional analysis of the human Sprouty2 gene promoter
Wei Ding1, Saverio Bellusci, Wei Shi
1Childrens Hospital Los Angeles Research Institute, Department of Pediatric Surgery, USC Keck School of Medicine, Los Angeles, CA 90027, USA.
Abstract:
Sprouty2 plays a key role in negatively modulating the fibroblast growth factor signaling pathway, which is required for early branching events in embryonic development. The expression of the murine Sprouty2 gene shows a temporally and spatially restricted pattern in developing lung. In order to clarify the molecular mechanisms governing the transcription of the Sprouty2 gene, we first characterized the genomic organization of the human Sprouty2 (hSpry2) gene and mapped its transcription start sites by 5'-rapid amplification of cDNA ends. Subsequently, a 4-kb sequence from the 5'-flanking region of the gene was cloned and determined to contain promoter activity. Detailed truncation analysis of the hSpry2 promoter revealed the presence of context-specific suppressor activity in the distal upstream region. More importantly, we demonstrated that all the elements necessary to achieve strong basal transcription activity were located within the proximal 0.4-kb region. Sequence analysis revealed that this functionally important proximal region contains neither TATA nor CAAT box but an initiator element around the transcription start site. Several cis-acting elements (including AP2, CREB, SP1 and Ets-1) were found to be present in the proximal region, and their interactions with specific nuclear proteins were confirmed by electrophoretic mobility shift assays. To our knowledge, this is the first promoter study of any mammalian Sprouty gene. We propose that the high-level basal expression of hSpry2 is controlled by multiple transcription factors binding to its proximal promoter.
Insights
The human Sprouty2 (hSpry2) gene promoter was characterized, revealing a proximal 0.4-kb region essential for high basal transcription. Multiple transcription factors bind this region to control hSpry2 expression during development.
Area of Science:
- Molecular Biology
- Developmental Biology
- Genetics
Background:
- Sprouty2 negatively regulates fibroblast growth factor signaling, crucial for embryonic development.
- Murine Sprouty2 gene expression is temporally and spatially restricted in the developing lung.
Purpose of the Study:
- To elucidate the molecular mechanisms governing human Sprouty2 (hSpry2) gene transcription.
- To characterize the promoter region of the hSpry2 gene.
Main Methods:
- Genomic organization and transcription start site mapping of hSpry2 using 5'-rapid amplification of cDNA ends.
- Cloning and functional analysis of the 5'-flanking region, including truncation analysis of the promoter.
- Electrophoretic mobility shift assays (EMSA) to confirm transcription factor binding.
Main Results:
- A 4-kb 5'-flanking sequence exhibits promoter activity.
- Distal upstream regions contain context-specific suppressor activity.
- A proximal 0.4-kb region contains all elements for strong basal transcription, including an initiator element but lacking TATA/CAAT boxes.
- Multiple cis-acting elements (AP2, CREB, SP1, Ets-1) in the proximal region bind specific nuclear proteins.
Conclusions:
- The proximal 0.4-kb region of the hSpry2 promoter is critical for high basal expression.
- Multiple transcription factors binding to the proximal promoter control hSpry2 expression.
- This is the first promoter study of a mammalian Sprouty gene, providing insights into its transcriptional regulation.
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