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Oligopeptide Competition Assay for Phosphorylation Site Determination
Published on: May 18, 2017
Dynamic changes in C-Raf phosphorylation and 14-3-3 protein binding in response to growth factor stimulation:
Mirko Hekman1, Stefan Wiese, Renate Metz
1Institute for Medical Radiation and Cell Research, University of Wuerzburg, 97078 Wuerzburg.
Abstract:
Phosphorylation events play a crucial role in Raf activation. Phosphorylation of serines 259 and 621 in C-Raf and serines 364 and 728 in B-Raf has been suggested to be critical for association with 14-3-3 proteins. To study the functional consequences of Raf phosphorylations at these positions, we developed and characterized phosphospecific antibodies directed against 14-3-3 binding epitopes: a monoclonal phosphospecific antibody (6B4) directed against pS621 and a polyclonal antibody specific for B-Raf-pS364 epitope. Although 6B4 detected both C- and B-Raf in Western blots, it specifically recognizes the native form of C-Raf but not B-Raf. Contrary to B-Raf, a kinase-dead mutant of C-Raf was found to be only poorly phosphorylated in the Ser-621 position. Moreover, serine 259 to alanine mutation prevented the Ser-621 phosphorylation suggesting an interdependence between these two 14-3-3 binding domains. Direct C-Raf.14-3-3 binding studies with purified proteins combined with competition assays revealed that the 14-3-3 binding domain surrounding pS621 represents the high affinity binding site, whereas the pS259 epitope mediates lower affinity binding. Raf isozymes differ in their 14-3-3 association rates. The time course of endogenous C-Raf activation in mammalian cells by nerve growth factor (NGF) has been examined using both phosphospecific antibodies directed against 14-3-3 binding sites (6B4 and anti-pS259) as well as phosphospecific antibodies directed against the activation domain (anti-pS338 and anti-pY340/pY341). Time course of Ser-621 phosphorylation, in contrast to Ser-259 phosphorylation, exhibited unexpected pattern reaching maximal phosphorylation within 30 s of NGF stimulation. Phosphorylation of tyrosine 340/341 reached maximal levels subsequent to Ser-621 phosphorylation and was coincident with emergence of kinase activity. Taken together, we found substantial differences between C-Raf.14-3-3 binding epitopes pS259 and pS621 and visualized for the first time the sequence of the essential C-Raf phosphorylation events in mammalian cells in response to growth factor stimulation.
Insights
Researchers developed phosphospecific antibodies to study Raf protein phosphorylation, revealing distinct 14-3-3 binding affinities and the sequence of C-Raf activation events following nerve growth factor stimulation.
Area of Science:
- Cellular signaling pathways
- Protein phosphorylation
- Signal transduction
Background:
- Phosphorylation is critical for Raf kinase activation and 14-3-3 protein association.
- Specific serine residues (S259/S621 in C-Raf, S364/S728 in B-Raf) are implicated in 14-3-3 binding.
Purpose of the Study:
- To develop and characterize phosphospecific antibodies for studying Raf phosphorylation at 14-3-3 binding sites.
- To investigate the functional consequences of Raf phosphorylation on 14-3-3 binding and kinase activity.
- To elucidate the temporal sequence of C-Raf phosphorylation events during activation.
Main Methods:
- Development of phosphospecific monoclonal (6B4 for pS621) and polyclonal antibodies.
- Western blot analysis of C-Raf and B-Raf.
- Kinase-dead mutant analysis.
- Direct protein binding and competition assays.
- Time-course analysis of endogenous C-Raf phosphorylation in response to nerve growth factor (NGF) using phosphospecific antibodies.
Main Results:
- The 6B4 antibody specifically recognizes native C-Raf, not B-Raf.
- Serine 259 phosphorylation is interdependent with Serine 621 phosphorylation in C-Raf.
- The pS621 epitope represents a high-affinity 14-3-3 binding site, while pS259 mediates lower affinity binding.
- NGF stimulation induced rapid Ser-621 phosphorylation preceding Ser-259 phosphorylation and kinase activity.
- Phosphorylation of Tyr-340/341 occurred after Ser-621 phosphorylation and coincided with kinase activation.
Conclusions:
- Substantial differences exist between C-Raf 14-3-3 binding epitopes pS259 and pS621.
- The study provides the first visualization of the sequential phosphorylation events essential for C-Raf activation in mammalian cells upon growth factor stimulation.
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