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A quantitative structure-antifungal activity relationship study of oxygenated aromatic essential oil compounds using
Karmen Voda1, Bojana Boh, Margareta Vrtacnik
1Department of Chemical Education and Informatics, Faculty of Natural Sciences and Engineering, University of Ljubljana, Vegova 4, 1000 Ljubljana, Slovenia. karmen.voda@uni-lj.si
Journal of Molecular Modeling
|December 23, 2003
Summary
This study investigated the antifungal activity of essential oil compounds against wood-decaying fungi. Molecular structure significantly influences antifungal efficacy, as revealed by quantitative structure-activity relationship (QSAR) analysis.
Area of Science:
- Mycology
- Natural Products Chemistry
- Computational Chemistry
Background:
- Wood-decaying fungi, Trametes versicolor and Coniophora puteana, cause significant material degradation.
- Essential oils contain oxygenated aromatic compounds with potential antimicrobial properties.
Purpose of the Study:
- To evaluate the antifungal activity of 22 oxygenated aromatic essential oil compounds against T. versicolor and C. puteana.
- To establish a relationship between the molecular structures of these compounds and their antifungal efficacy.
- To perform a quantitative structure-activity relationship (QSAR) analysis to identify key structural determinants of activity.
Main Methods:
- Minimal inhibitory concentrations (MICs) were determined using the agar dilution method.
- Dimethyl sulfoxide (DMSO) was used as a solvent, and potato-dextrose agar (PDA) as the growth medium.
- QSAR analysis was performed using the partial least squares (PLS) method.
Main Results:
- A tree structure revealed a correlation between compound structure and antifungal activity.
- Statistically significant PLS models were developed for both fungi.
- Key molecular descriptors identified for T. versicolor included 1-octanol-water partition coefficient (C log P), energy of the highest occupied molecular orbital (E(HOMO)), and hydrogen-bond donor atoms (Donor).
- For C. puteana, significant descriptors were C log P and fractional negative surface area (FNSA1).
Conclusions:
- A clear relationship exists between the molecular structure of oxygenated aromatic essential oil compounds and their antifungal activity against wood-decaying fungi.
- QSAR modeling provides valuable insights for designing more potent antifungal agents from essential oils.