Nuclear retention of unspliced mRNAs in yeast is mediated by perinuclear Mlp1
Vincent Galy1, Olivier Gadal, Micheline Fromont-Racine
1Unité de Biologie Cellulaire du Noyau, CNRS URA 2582, Institut Pasteur, 25 rue du Docteur Roux, 75724 Paris Cedex 15, France.
Abstract:
The molecular mechanism underlying the retention of intron-containing mRNAs in the nucleus is not understood. Here, we show that retention of intron-containing mRNAs in yeast is mediated by perinuclearly located Mlp1. Deletion of MLP1 impairs retention while having no effect on mRNA splicing. The Mlp1-dependent leakage of intron-containing RNAs is increased in presence of ts-prp18 delta, a splicing mutant. When overall pre-mRNA levels are increased by deletion of RRP6, a nuclear exosome component, MLP1 deletion augments leakage of only the intron-containing portion of mRNAs. Our data suggest, moreover, that Mlp1-dependent retention is mediated via the 5' splice site. Intriguingly, we found Mlp-proteins to be present only on sections of the NE adjacent to chromatin. We propose that at this confined site the perinuclear Mlp1 implements a quality control step prior to export, physically retaining faulty pre-mRNAs.
Insights
Nuclear retention of intron-containing mRNAs in yeast is mediated by perinuclear Mlp1 protein. Deleting MLP1 reduces retention, suggesting Mlp1 acts as a nuclear quality control mechanism for mRNA export.
Area of Science:
- Molecular Biology
- Cell Biology
- Yeast Genetics
Background:
- The nuclear retention mechanism for intron-containing mRNAs remains unclear.
- Understanding mRNA processing and export is crucial for gene expression regulation.
Purpose of the Study:
- To elucidate the molecular mechanism of intron-containing mRNA nuclear retention in yeast.
- To identify key proteins involved in regulating mRNA export.
Main Methods:
- Gene deletion studies in yeast (MLP1, RRP6).
- Analysis of mRNA splicing and nuclear retention.
- Investigation of splicing mutants (ts-prp18 delta).
- Localization studies of Mlp1 protein.
Main Results:
- Perinuclear Mlp1 mediates the retention of intron-containing mRNAs.
- MLP1 deletion impairs retention without affecting splicing efficiency.
- Mlp1-dependent RNA leakage is exacerbated in splicing mutants and when nuclear exosome function is compromised.
- Retention is linked to the 5' splice site, and Mlp1 localizes to chromatin-associated nuclear envelope regions.
Conclusions:
- Perinuclear Mlp1 functions as a critical quality control factor, retaining faulty pre-mRNAs at the nuclear envelope before export.
- This mechanism ensures the fidelity of mRNA export and subsequent protein synthesis.
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