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Identification of Krüppel-like factor 4 as a potential tumor suppressor gene in colorectal cancer
Weidong Zhao1, Irfan M Hisamuddin, Mandayam O Nandan
1Department of Medicine, Division of Digestive Diseases, Emory University School of Medicine, Atlanta, GA 30322, USA.
Abstract:
Krüppel-like factor 4 (KLF4 or GKLF) is an inhibitor of the cell cycle. The gene encoding KLF4 is localized on chromosome 9q, previously shown to exhibit allelic loss in colorectal cancer (CRC). In this study, we show that the mean level of KLF4 mRNA in a panel of 30 CRC was 52% that of paired normal colonic tissues. Similarly, the levels of KLF4 mRNA and protein in a panel of six established CRC cell lines were significantly lower than those of an untransformed colonic epithelial cell line. Using highly polymorphic DNA markers that flank the KLF4 locus, we found evidence for loss of heterozygosity (LOH) in two of eight surgically resected CRC specimens. In addition, LOH was observed in five of six CRC cell lines with one additional cell line exhibiting hemizygous deletion in the KLF4 gene. We also found that the 5'-untranslated region of KLF4 was hypermethylated in a subset of resected CRC specimens and cell lines. Lastly, the open-reading frame of KLF4 in two of three CRC cell lines examined contained several point mutations that resulted in a diminished ability to activate the p21(WAF1/Cip1) promoter. These findings indicate that KLF4 is a potential tumor suppressor gene in CRC.
Insights
Krüppel-like factor 4 (KLF4) is a cell cycle inhibitor. Reduced KLF4 levels and genetic alterations in colorectal cancer (CRC) suggest it acts as a tumor suppressor gene in CRC development.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Krüppel-like factor 4 (KLF4) functions as a cell cycle inhibitor.
- The KLF4 gene is located on chromosome 9q and has shown allelic loss in colorectal cancer (CRC).
Purpose of the Study:
- To investigate the role of KLF4 in colorectal cancer.
- To determine if KLF4 functions as a tumor suppressor gene in CRC.
Main Methods:
- Quantitative analysis of KLF4 mRNA and protein levels in CRC tissues and cell lines.
- Loss of heterozygosity (LOH) analysis using polymorphic DNA markers.
- Analysis of KLF4 gene promoter methylation and point mutations.
- Assessment of KLF4's ability to activate the p21(WAF1/Cip1) promoter.
Main Results:
- KLF4 mRNA levels were significantly reduced (52%) in CRC tissues compared to normal tissues.
- KLF4 mRNA and protein were lower in CRC cell lines than in normal colonic epithelial cells.
- Evidence of LOH at the KLF4 locus was found in CRC specimens and cell lines.
- Hypermethylation of the KLF4 5'-untranslated region and point mutations in the open-reading frame were observed in CRC.
- Mutations in KLF4 resulted in diminished activation of the p21(WAF1/Cip1) promoter.
Conclusions:
- KLF4 expression is frequently downregulated in colorectal cancer.
- Genetic alterations including LOH, hypermethylation, and point mutations affect KLF4 in CRC.
- These findings support KLF4's role as a potential tumor suppressor gene in colorectal cancer development.
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