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Peptide Scanning-assisted Identification of a Monoclonal Antibody-recognized Linear B-cell Epitope
Published on: March 24, 2017
Structural analysis of the epitopes on erbB2 interacted with inhibitory or non-inhibitory monoclonal antibodies
1Department of Molecular Immunology, Institute of Basic Medical Sciences, Taiping Road 27, Beijing 100850, PR China.
Abstract:
erbB2 oncogene encodes a growth factor receptor. The overexpression of erbB2 was correlated with more aggressive tumors and a poorer prognosis. Some antibodies directed to this molecule have an antitumor effect in vivo, but some antibodies do not. In an attempt to understand the molecular basis of the anti-erbB2 antibody interaction with erbB2 ectodomain (ECD), we analyzed binding epitopes on erbB2 for inhibitory and non-inhibitory antibodies, Herceptin and HF by computer-guided protein engineering and site-directed mutagenesis. Two different interaction domains were identified by molecular docking, computer graphics and distance geometry method and confirmed through studies on a series of mutants of erbB2 ECD. Non-inhibitory antibody HF only recognized N-terminal portion of erbB2 ECD, but inhibitory antibody Herceptin bound to C-terminal portion of it exclusively. The region interacted with inhibitory antibody Herceptin can be an important target for anticancer therapies.
Insights
The erbB2 oncogene is linked to aggressive cancers. Inhibitory antibodies like Herceptin bind the C-terminal domain of erbB2, offering a potential anticancer therapy target.
Area of Science:
- Oncology
- Molecular Biology
- Immunology
Background:
- The erbB2 oncogene, a growth factor receptor, is overexpressed in aggressive tumors, correlating with poorer prognoses.
- Antibodies targeting erbB2 show variable antitumor effects, necessitating a deeper understanding of their interaction mechanisms.
Purpose of the Study:
- To elucidate the molecular basis of anti-erbB2 antibody interactions with the erbB2 ectodomain (ECD).
- To identify distinct binding epitopes for inhibitory and non-inhibitory antibodies, specifically Herceptin and HF.
Main Methods:
- Utilized computer-guided protein engineering and site-directed mutagenesis to analyze erbB2 ECD binding sites.
- Employed molecular docking, computer graphics, and distance geometry methods to identify interaction domains.
- Confirmed findings through studies on a series of erbB2 ECD mutants.
Main Results:
- Identified two distinct interaction domains on the erbB2 ECD for antibody binding.
- The non-inhibitory antibody HF recognized the N-terminal portion of the erbB2 ECD.
- The inhibitory antibody Herceptin exclusively bound to the C-terminal portion of the erbB2 ECD.
Conclusions:
- Antibody binding site on erbB2 ECD dictates inhibitory or non-inhibitory effects.
- The C-terminal region of erbB2 ECD, targeted by Herceptin, represents a significant target for developing novel anticancer therapies.
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