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Quantification of Orofacial Phenotypes in Xenopus
Published on: November 6, 2014
Nonsyndromic cleft lip and palate: four chromosomal regions of interest
Susan H Blanton1, Terry Bertin, Sketa Patel
1University of Virginia, Charlottesville, Virginia, USA.
Insights
Nonsyndromic cleft lip with or without cleft palate (NSCLP) is a common birth defect. This study identified eight chromosomal regions associated with NSCLP, with one region showing consistent evidence across multiple studies.
Area of Science:
- Genetics
- Birth Defects
- Genomic Research
Background:
- Nonsyndromic cleft lip with or without cleft palate (NSCLP) affects 1/700 live births, causing significant morbidity and healthcare costs.
- NSCLP is a complex disorder influenced by both genetic and environmental factors.
- Previous genomic scans have indicated potential chromosomal regions linked to NSCLP.
Purpose of the Study:
- To evaluate chromosomal regions previously identified in genomic scans for association with NSCLP.
- To identify specific genetic loci contributing to the development of NSCLP.
Main Methods:
- Analysis of sixty-five multiplex families with NSCLP.
- Evaluation of chromosomal regions from a prior affected sib-pair genomic scan.
- Comparison of findings with a second genomic scan of multiplex families from China.
Main Results:
- Evidence of association for NSCLP was found in eight chromosomal regions.
- Four regions (2q37, 11p12-14, 12q13, and 16p13) were identified in both this study and a Chinese cohort.
- The region defined by D11S1392 showed consistent evidence of an NSCLP locus across three independent studies.
Conclusions:
- The identified chromosomal regions warrant further investigation for NSCLP loci.
- These findings provide a targeted approach for future genetic studies to pinpoint genes responsible for NSCLP.
- Consistent results across studies strengthen the evidence for these regions' involvement in NSCLP etiology.
Abstract:
Nonsyndromic cleft lip with or without cleft palate (NSCLP), a common birth defect affecting 1/700 live births and 4,000 newborns/year in the United States, is associated with short and long-term morbidity. As such, it has significant impact on the health care system. NSCLP is a complex disorder that results from the interaction of genetic and environmental factors that are slowly being defined. Genomic scans have suggested a number of regions that may contain NSCLP loci. In this study, we have evaluated regions identified by a previously published genomic scan of affected sib-pairs and have found evidence of association in sixty-five multiplex families for eight chromosomal regions. Four of these regions, 2q37, 11p12-14, 12q13, and 16p13, have also been identified in second genomic scan of multiplex families from China. One region, defined by D11S1392, gave evidence suggesting the presence of an NSCLP locus in all three studies. Altogether, these results suggest chromosomal regions that should be targeted in order to identify NSCLP loci.
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