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The multiple orthogonal tools approach to define molecular causation in the validation of druggable targets
1Aurigene Discovery Technologies, Lexington, MO 02420, USA. larry_h@aurigene.com
Abstract:
Many genetic (gene deletion, interruption or mutation), epigenetic (such as antisense or small interfering RNA) and immunological methods are being applied in 'high-throughput target validation' studies of the novel potential targets arising from whole genome sequencing. Such applications often focus on 'loss of function' approaches. However, target validation is most reliable when multiple orthogonal approaches are used. Initiating a target-based discovery project based on correlative evidence is faster than awaiting causative evidence. Indeed, the multiple tools needed to generate firm proof usually include methods and reagents only generated after starting a discovery project with little evidence beyond correlations. Robust and rigorous tests of whether a drug candidate is efficacious in vivo because of its effects on a specific molecular particular target are best made by simultaneously applying multiple orthogonal tools. Examples of the orthogonal tools approach will be discussed.
Insights
High-throughput target validation uses genetic and epigenetic methods. Combining multiple orthogonal approaches provides the most reliable evidence for drug target validation and efficacy.
Area of Science:
- Genetics
- Epigenetics
- Immunology
- Pharmacology
Background:
- High-throughput target validation is crucial for novel drug discovery, often employing genetic and epigenetic methods.
- Current approaches frequently rely on loss-of-function studies, which may not provide comprehensive validation.
- Initiating drug discovery projects based on correlative evidence is common but less definitive than causative evidence.
Purpose of the Study:
- To emphasize the importance of orthogonal approaches in target validation.
- To highlight the limitations of relying solely on loss-of-function studies.
- To advocate for the integrated use of multiple methods for robust drug target validation.
Main Methods:
- Application of genetic methods (gene deletion, interruption, mutation).
- Utilization of epigenetic methods (antisense RNA, small interfering RNA).
- Integration of immunological methods and other orthogonal tools.
Main Results:
- Orthogonal approaches provide more reliable target validation than single methods.
- Correlative evidence allows for faster project initiation but requires further validation.
- Robust in vivo efficacy testing necessitates simultaneous application of multiple orthogonal tools.
Conclusions:
- Multiple orthogonal approaches are essential for reliable high-throughput target validation.
- Combining diverse methods strengthens the evidence for a drug candidate's efficacy and target engagement.
- The orthogonal tools approach is critical for rigorous drug discovery and development.
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