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In vivo Interrogation of Central Nervous System Translatome by Polyribosome Fractionation
Published on: April 30, 2014
miRNP:mRNA association in polyribosomes in a human neuronal cell line
Peter T Nelson1, Artemis G Hatzigeorgiou, Zissimos Mourelatos
1Department of Pathology, School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Abstract:
MicroRNAs (miRNAs) are small regulatory RNAs that control gene expression by base-pairing with their mRNA targets. miRNAs assemble into ribonucleoprotein complexes termed miRNPs. Animal miRNAs recognize their mRNA targets via partial antisense complementarity and repress mRNA translation at a step after translation initiation. How animal miRNAs recognize their mRNA targets and how they control their translation is unknown. Here we describe that in a human neuronal cell line, the miRNP proteins eIF2C2 (a member of the Argonaute family of proteins), Gemin3, and Gemin4 along with miRNAs cosediment with polyribosomes. Furthermore, we describe a physical association between a let-7b (miRNA)-containing miRNP and its putative human mRNA target in polyribosome-containing fractions. These findings suggest that miRNP proteins may play important roles in target mRNA recognition and translational repression.
Insights
Small regulatory RNAs called microRNAs (miRNAs) control gene expression. This study shows that miRNA-protein complexes (miRNPs) physically associate with target messenger RNAs (mRNAs) on polyribosomes, suggesting a role in translation regulation.
Area of Science:
- Molecular Biology
- Genetics
- RNA Biology
Background:
- MicroRNAs (miRNAs) are small regulatory RNAs that modulate gene expression post-transcriptionally.
- miRNAs function within ribonucleoprotein complexes (miRNPs) to regulate translation.
- The precise mechanisms of mRNA target recognition and translational repression by animal miRNAs remain unclear.
Purpose of the Study:
- To investigate the molecular mechanisms underlying miRNA-mediated translational repression.
- To identify the protein components of miRNPs involved in target recognition.
- To explore the association of miRNPs with actively translated mRNAs.
Main Methods:
- Utilized a human neuronal cell line for experimental analysis.
- Employed ultracentrifugation to cosediment miRNPs with polyribosomes.
- Performed co-immunoprecipitation assays to detect physical interactions between miRNPs and mRNA targets.
Main Results:
- Key miRNP proteins, including eIF2C2, Gemin3, and Gemin4, were found to cosediment with miRNAs on polyribosomes.
- A physical association was demonstrated between a let-7b miRNA-containing miRNP and its predicted human mRNA target within polyribosome fractions.
- These findings indicate that miRNPs are recruited to actively translating mRNAs.
Conclusions:
- The study provides evidence that miRNP proteins are integral components of the translational machinery.
- Results suggest that miRNPs play a direct role in the recognition of specific mRNA targets.
- These interactions likely mediate translational repression, offering insights into gene expression control by miRNAs.
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