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Enhanced Reduced Representation Bisulfite Sequencing for Assessment of DNA Methylation at Base Pair Resolution
Published on: February 24, 2015
SOCS1 and SHP1 hypermethylation in multiple myeloma: implications for epigenetic activation of the Jak/STAT pathway
Chor-Sang Chim1, Tsz-Kin Fung, Wai-Chung Cheung
1University Department of Medicine, Queen Mary Hospital, Pokfulam Road, Hong Kong.
Abstract:
SOCS1 and SHP1 negatively regulate the Janus kinase/signal transducer and activator of transcription (Jak/STAT) signaling pathway. The role of promoter hypermethylation leading to epigenetic inactivation of SOCS1 and SHP1 in myeloma was investigated. The methylation-specific polymerase chain reaction (MSP) was used to define SOCS1 and SHP1 methylation in 34 diagnostic myeloma samples. For SOCS1, MSP primers 3' to the translation start site were unreliable and gave positive results in normal controls. However, primers in the 5' promoter region were specific, although no myeloma samples showed methylation. For SHP1, 27 of 34 (79.4%) myeloma samples showed SHP1 hypermethylation. The biologic significance of SHP1 methylation was investigated in the U266 human myeloma line. U266 contained completely methylated SHP1. Furthermore, there was constitutive STAT3 phosphorylation. Treatment with 5-azacytidine led to progressive demethylation of SHP1 on days 2 to 5, with consequent increasing reexpression of SHP1 as shown by reverse transcription-polymerase chain reaction (RT-PCR). Concomitant with increasing SHP1, a parallel down-regulation of phosphorylated STAT3 occurred, so that by day 5 phosphorylated STAT3 was barely detectable. The overall survivals of patients with and without SHP1 methylation were similar. SHP1 methylation leading to epigenetic activation of the Jak/STAT pathway might have a tentative role in the pathogenesis of myeloma, which should be further confirmed by functional studies in primary myeloma samples.
Insights
Promoter hypermethylation epigenetically inactivates SHP1 in most myeloma patients, potentially activating the Jak/STAT pathway. Demethylation therapy restored SHP1, down-regulating STAT3 phosphorylation.
Area of Science:
- Molecular Biology
- Epigenetics
- Cancer Biology
Background:
- Suppressor of Cytokine Signaling 1 (SOCS1) and SH2 domain-containing phosphatase 1 (SHP1) are negative regulators of the Janus kinase/Signal Transducer and Activator of Transcription (Jak/STAT) pathway.
- Epigenetic silencing via promoter hypermethylation is a known mechanism for gene inactivation in various cancers, including multiple myeloma.
Purpose of the Study:
- To investigate the role of promoter hypermethylation in the epigenetic inactivation of SOCS1 and SHP1 in multiple myeloma.
- To explore the biological significance of SHP1 methylation and its impact on the Jak/STAT pathway in myeloma.
Main Methods:
- Methylation-specific polymerase chain reaction (MSP) was employed to assess SOCS1 and SHP1 promoter methylation in 34 diagnostic myeloma samples.
- The U266 human myeloma cell line was used to study the effects of SHP1 methylation and 5-azacytidine treatment on SHP1 expression and STAT3 phosphorylation.
- Reverse transcription-polymerase chain reaction (RT-PCR) was utilized to confirm SHP1 re-expression upon demethylation.
Main Results:
- No significant SOCS1 promoter methylation was detected in myeloma samples using specific promoter region primers.
- SHP1 hypermethylation was observed in 79.4% (27 of 34) of myeloma samples.
- In the U266 cell line, SHP1 demethylation induced by 5-azacytidine led to progressive SHP1 re-expression and a parallel down-regulation of phosphorylated STAT3.
Conclusions:
- SHP1 promoter hypermethylation is a frequent event in multiple myeloma, suggesting epigenetic inactivation of this tumor suppressor.
- Epigenetic inactivation of SHP1 may contribute to the activation of the Jak/STAT pathway in myeloma pathogenesis.
- Further functional studies are warranted to confirm the role of SHP1 methylation in myeloma development and progression.
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