Identification of ALDH4 as a p53-inducible gene and its protective role in cellular stresses
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Updated: Aug 26, 2026

Yeast As a Chassis for Developing Functional Assays to Study Human P53
Published on: August 4, 2019
Kyong-Ah Yoon1, Yusuke Nakamura1, Hirofumi Arakawa2,3
1Human Genome Center, Institute of Medical Science, University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639, Japan.
Abstract:
To identify additional targets of p53, we used a cDNA microarray system to examine gene-expression patterns in response to enforced expression of exogenous p53 in p53-deficient cancer cells, and identified the aldehyde dehydrogenase 4 ( ALDH4) gene as a direct target of p53. ALDH4 is a mitochondrial-matrix NAD+-dependent enzyme catalyzing the second step of the proline degradation pathway. Expression of ALDH4 mRNA was induced in HCT116 cells in response to DNA damage caused by adriamycin treatment, in a p53-dependent manner. ALDH4 contains a potential p53 binding sequence in intron1 and the interaction of p53 with the site was shown by EMSA and ChIP assays. We confirmed p53-dependent transcriptional activity of the binding site by means of a reporter assay. Inhibition of ALDH4 expression by antisense oligonucleotides was able to enhance cell death induced by infection with Ad-p53. H1299 cells transformed to over-express ALDH4 showed significantly lower intracellular reactive oxygen species (ROS) levels than parental or control cells after treatment with hydrogen peroxide or UV. Those cells were also resistant to cell damage caused by hydrogen peroxide. These results suggest that p53 might play a protective role against cell damage induced by generation of intracellular ROS, through transcriptional activation of ALDH4.
Insights
The tumor suppressor p53 directly activates ALDH4 gene expression, which helps cancer cells resist damage from reactive oxygen species (ROS). This finding reveals a new protective mechanism mediated by p53.
Area of Science:
- Molecular Biology
- Cancer Research
- Cellular Biology
Background:
- The tumor suppressor protein p53 is a critical regulator of cellular responses to stress.
- Identifying novel p53 targets is crucial for understanding its multifaceted roles in cancer.
Purpose of the Study:
- To identify new genes directly regulated by p53.
- To investigate the role of aldehyde dehydrogenase 4 (ALDH4) in p53-mediated cellular protection.
Main Methods:
- cDNA microarray analysis to screen for p53-regulated genes.
- Electrophoretic mobility shift assay (EMSA) and ChIP assays to confirm p53 binding.
- Reporter assays to assess transcriptional activity.
- Antisense oligonucleotide inhibition and cell viability assays.
Main Results:
- Aldehyde dehydrogenase 4 (ALDH4) was identified as a direct transcriptional target of p53.
- ALDH4 expression is induced by DNA damage in a p53-dependent manner.
- Overexpression of ALDH4 confers resistance to reactive oxygen species (ROS)-induced cell damage.
Conclusions:
- p53 directly activates ALDH4 transcription, contributing to cellular defense against ROS.
- ALDH4 may play a significant role in the protective functions of p53 against oxidative stress and cell death.
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