The molecular defect leading to Fabry disease: structure of human alpha-galactosidase

Scott C Garman1, David N Garboczi

  • 1Structural Biology Section, Laboratory of Immunogenetics, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Twinbrook II, 12441 Parklawn Drive, Rockville, MD 20852, USA. sgarman@niaid.nih.gov

Insights

Researchers determined the 3D structure of human alpha-galactosidase (alpha-GAL), revealing its catalytic mechanism and mutation sites. This structural insight into alpha-GAL advances understanding of Fabry disease.

Area of Science:

  • Biochemistry
  • Structural Biology
  • Genetics

Background:

  • Fabry disease is an X-linked lysosomal storage disorder caused by alpha-galactosidase (alpha-GAL) deficiency.
  • This deficiency leads to substrate accumulation, causing symptoms like chronic pain and organ damage.

Purpose of the Study:

  • To elucidate the three-dimensional structure of human alpha-GAL.
  • To understand the enzyme's catalytic mechanism and substrate binding.
  • To map Fabry disease-associated mutations onto the protein structure.

Main Methods:

  • X-ray crystallography was used to determine the structure of the human alpha-GAL glycoprotein.
  • The structure of the alpha-GAL-product complex was determined to reveal the catalytic mechanism.
  • Missense and nonsense mutations were cataloged and mapped onto the 3D structure.

Main Results:

  • The human alpha-GAL structure was determined as a homodimer with distinct functional domains.
  • N-linked glycosylation sites were identified, explaining lysosomal transport via the mannose-6-phosphate receptor.
  • The catalytic mechanism was elucidated, highlighting the roles of aspartic acid residues D170 and D231.
  • 245 disease-associated mutations were mapped onto the structure.

Conclusions:

  • The determined structure provides a molecular basis for understanding Fabry disease.
  • Structural insights can guide the development of targeted therapies for Fabry disease.
  • This work positions Fabry disease as a molecular disease with a defined structural basis.

Related Concept Videos

Amyloid Fibrils03:03

Amyloid Fibrils

Amyloid fibrils are aggregates of misfolded proteins.  Under most circumstances, misfolded proteins are either refolded by chaperone proteins or degraded by the proteasome. However, in the case of a mutation or a disease, these proteins can accumulate to form large clusters and often further assemble to form elongated fibers, called fibrils. 
Amyloid deposits were observed as early as 1639 in the liver and the spleen.   In 1854, Rudolph Virchow performed iodine staining, normally used to...
Amyloid Fibrils03:03

Amyloid Fibrils

Amyloid fibrils are aggregates of misfolded proteins.  Under most circumstances, misfolded proteins are either refolded by chaperone proteins or degraded by the proteasome. However, in the case of a mutation or a disease, these proteins can accumulate to form large clusters and often further assemble to form elongated fibers, called fibrils. 
Amyloid deposits were observed as early as 1639 in the liver and the spleen.   In 1854, Rudolph Virchow performed iodine staining, normally used to...
Type IV Collagen of Basal Lamina01:05

Type IV Collagen of Basal Lamina

Type IV collagen is a 400 nm long, network-forming collagen that acts as a barrier between the epithelial and endothelial cells. Type IV collagen  forms the backbone of the basement membrane by scaffolding with laminin, entactin, proteoglycans, and fibronectin. Apart from rendering structural support to the basement membrane, it also helps entail signaling potentials necessary for both pathological and physiological functions.
A type IV collagen molecule has six alpha chains which can exist in...
Lysosomal Hydrolases01:22

Lysosomal Hydrolases

Lysosomes are the site for the degradation of macromolecules and biological polymers released during membrane trafficking events such as secretory, endocytic, autophagic, and phagocytic pathways. The membrane-enclosed area of the lysosome, called the lumen, contains hydrolytic enzymes active in an acidic environment. These acid hydrolases are functional at a pH between 4.5 and 5 and are involved in cellular processes such as cell signaling, energy metabolism, restoration of the plasma membrane,...
ATP Synthase: Mechanism01:48

ATP Synthase: Mechanism

In animals, the mitochondrial F1F0 ATP synthase is the key protein that synthesizes ATP molecules through a complex catalytic mechanism. While the nuclear genome encodes the majority of ATP synthase subunits, the mitochondrial genome encodes some of the enzyme's most critical components. The formation of this multi-subunit enzyme is a complex multi-step process regulated at the level of transcription, translation, and assembly. Defects in one or more of these steps can result in decreased ATP...
Inborn Errors of Metabolism01:20

Inborn Errors of Metabolism

Phenylketonuria (PKU) is a protein metabolism disorder characterized by high blood levels of the amino acid phenylalanine. This results from a mutation in the gene responsible for phenylalanine hydroxylase, an enzyme that converts phenylalanine into tyrosine. When this enzyme is deficient, phenylalanine builds up in the blood, leading to symptoms such as vomiting, rashes, seizures, growth deficiency, and severe mental retardation. An early diagnosis and a diet restricting phenylalanine intake...