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The Sup35 domains required for maintenance of weak, strong or undifferentiated yeast [PSI+] prions
Michael E Bradley1, Susan W Liebman
1Department of Biological Sciences, Laboratory for Molecular Biology, University of Illinois at Chicago, 900 South Ashland Avenue, Chicago, IL 60607, USA.
Abstract:
The Sup35 protein can exist in a non-infectious form or in various infectious forms called [PSI+] prion variants (or prion strains). Each of the different [PSI+] prion variants converts non-infectious Sup35 molecules into that prion variant's infectious form. One definition of a 'prion domain' is the minimal fragment of a prion protein that is necessary and sufficient to maintain the prion form. We now demonstrate that the Sup35 N region (residues 1-123), which is frequently referred to as the 'prion domain', is insufficient to maintain the weak or strong [PSI+] variants per se, but appears to maintain them in an 'undifferentiated' [PSI+] state that can differentiate into weak or strong [PSI+] variants when transferred to the full-length Sup35 protein. In contrast, Sup35 residues 1-137 are necessary and sufficient to faithfully maintain weak or strong [PSI+] variants. This implicates Sup35 residues 124-137 in the variant-specific maintenance of the weak or strong [PSI+] forms. Structure predictions indicate that the residues in the 124-137 region form an alpha-helix and that the 1-123 region may have beta structure. In view of these findings, we discuss a plausible molecular basis for the [PSI+] prion variants as well as the inherent difficulties in defining a 'prion domain'.
Insights
The Sup35 prion domain (residues 1-123) is insufficient to maintain [PSI+] prion variants. Residues 1-137 are necessary and sufficient, implicating residues 124-137 in variant-specific prion maintenance.
Area of Science:
- Protein biochemistry
- Prion biology
- Molecular genetics
Background:
- The Sup35 protein forms infectious prion variants known as [PSI+].
- Prion domains are minimal protein fragments maintaining prion forms.
- The Sup35 N-terminal region (residues 1-123) is often considered the prion domain.
Purpose of the Study:
- To investigate the minimal region of Sup35 required for maintaining distinct [PSI+] prion variants.
- To determine the sufficiency of the N-terminal region (1-123) for prion variant stability.
- To identify specific residues involved in variant-specific prion maintenance.
Main Methods:
- In vitro assays using Sup35 protein fragments.
- Analysis of prion variant stability and differentiation.
- Computational structure prediction of Sup35 regions.
Main Results:
- The Sup35 N-terminal region (residues 1-123) is insufficient to maintain weak or strong [PSI+] variants independently.
- Residues 1-123 maintain an 'undifferentiated' [PSI+] state that requires full-length Sup35 for differentiation.
- Sup35 residues 1-137 are necessary and sufficient for maintaining both weak and strong [PSI+] variants.
- Residues 124-137 are implicated in the variant-specific maintenance of [PSI+] forms.
- Structural predictions suggest alpha-helical structure for residues 124-137 and potential beta-structure for residues 1-123.
Conclusions:
- The definition of a 'prion domain' requires re-evaluation based on variant-specific maintenance.
- Residues 124-137 of Sup35 play a critical role in the stability and specificity of [PSI+] prion variants.
- These findings provide insights into the molecular basis of prion strain diversity.
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