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A Method for Screening and Validation of Resistant Mutations Against Kinase Inhibitors
Published on: December 7, 2014
Changes associated with the development of resistance to imatinib (STI571) in two leukemia cell lines expressing p210
Barbara Scappini1, Simona Gatto, Francesco Onida
1Department of Leukemia, The University of Texas M D Anderson Cancer Center, Houston, Texas 77030, USA.
Background:
Although various mechanisms have been recognized as being associated with the development of resistance to imatinib mesylate in vitro and in clinical situations, their relative significance and contributions remain poorly understood, as is the sequence of events leading to the selection of the resistant phenotype. Experimental in vitro systems involving well defined cell lines and conditions can be used to some advantage to answer specific questions and to develop in vitro models of imatinib resistance that would reflect its potential heterogeneity.
Methods:
Two cell lines, KBM5 and KBM7, which expressed p210 Bcr/Abl and which differed in their inherent sensitivity to imatinib, the number of copies of the BCR/ABL fusion gene, and the activation of apoptotic pathways, were grown in vitro in the presence of increasing concentrations of imatinib. The resistant cells were analyzed for cell cycle progression, apoptotic response after exposure to imatinib, expression of Bcr/Abl, tyrosine kinase activity, and the presence of mutations within the adenosine triphosphate (ATP) coding domain of BCR/ABL. At various levels of resistance, the cells were transferred into drug-free media, and the stability of the resistant phenotype was determined in the absence of the drug.
Results:
In KBM7 cells, the development of resistance was characterized by loss of apoptotic response to the drug, amplification of BCR/ABL, increased levels of expression of p210 Bcr/Abl, and decreased inhibition of Bcr/Abl tyrosine kinase (TK) activity by imatinib. No mutations within the ATP-binding domain of Bcr/Abl were identified, and resistance remained stable in the absence of the drug. In KBM5 cells, which previously were found to be characterized by the acquisition of a single C-T mutation at ABL nucleotide 944 (T315I) at high levels of resistance, this same mutation was detected at an intermediate level, but not at a low level, of resistance. The response of KBM5 cells to imatinib was characterized by a low level of apoptotic response, a marginal increase in BCR/ABL copy number, a modest increase in p210 expression, and a highly imatinib-resistant Bcr/Abl TK. Partial reversal of resistance was observed in highly resistant KBM5-STI571(R1.0) cells, which continued to display the C-T mutation. In KBM5 cells with an intermediate level of resistance, the T315I mutation was no longer detectable upon their reversal to the sensitive phenotype.
Conclusions:
BCR/ABL amplification with subsequent overexpression of Bcr/Abl protein, loss of apoptotic response, or point mutation of the ATP-binding site of BCR/ABL was associated alternatively with the acquisition of the resistant phenotype, supporting the notion that multiple mechanisms are involved in the induction of resistance to imatinib. The initial number of BCR/ABL copies itself was not related directly to the degree of resistance. The reversibility of the resistance may be complete, partial, or irreversible, depending on the mechanism(s) involved and the degree of resistance. Both cell lines serve as models for further elucidation of various aspects of imatinib-resistance mechanisms.
Insights
Multiple mechanisms, including BCR/ABL amplification and mutations, contribute to imatinib resistance. Resistance can be stable or reversible, depending on the specific genetic alterations and drug concentration.
Area of Science:
- Oncology
- Molecular Biology
- Pharmacology
Background:
- Imatinib mesylate resistance is a clinical challenge.
- Mechanisms and sequence of resistance development are not fully understood.
- In vitro models can elucidate imatinib resistance heterogeneity.
Purpose of the Study:
- To investigate mechanisms of imatinib resistance in vitro.
- To compare resistance development in two distinct cell lines.
- To assess the stability and reversibility of acquired resistance.
Main Methods:
- Two BCR/ABL-positive cell lines (KBM5, KBM7) with differential sensitivity were cultured with increasing imatinib concentrations.
- Resistant cells were analyzed for cell cycle, apoptosis, Bcr/Abl expression, tyrosine kinase activity, and BCR/ABL mutations.
- Phenotypic stability was assessed after drug withdrawal.
Main Results:
- KBM7 cells developed resistance via BCR/ABL amplification, increased p210 Bcr/Abl expression, and reduced apoptosis, without mutations.
- KBM5 cells acquired the T315I mutation at intermediate resistance levels, leading to a highly resistant Bcr/Abl tyrosine kinase.
- Resistance reversibility varied, with partial reversal observed in some KBM5 sublines.
Conclusions:
- BCR/ABL amplification, altered apoptosis, or ATP-binding site mutations are key mechanisms for imatinib resistance.
- Initial BCR/ABL copy number does not directly correlate with resistance severity.
- Resistance reversibility is dependent on the underlying mechanism and resistance level, highlighting the complexity of imatinib resistance.
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