Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Experiment Videos

NeuroSys: a semistructured laboratory database.

Sandy Pittendrigh1, Gwen Jacobs

  • 1Department of Cell Biology & Neuroscience, Montana State University, Bozeman, MT, USA. sandy@cns.montana.edu

Neuroinformatics
|March 30, 2004
PubMed
Summary
This summary is machine-generated.

Related Concept Videos

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Best Practices for Aripiprazole Lauroxil Administration: From Formulation Development to Injection Technique.

Journal of psychiatric practice·2019
Same journal

Metabolically Faithful 3D PET Restoration via Volumetric Swin Transformers.

Neuroinformatics·2026
Same journal

CytoCLIP: Learning Cytoarchitectural Characteristics in Developing Human Brain Using Contrastive Language Image Pre-Training.

Neuroinformatics·2026
Same journal

Increasing the Reliability of Functional Connectivity by Predicting Long-Scan Functional Connectivity based on Short-Scan Functional Connectivity: Model Exploration, Explanation, Validation, and Application.

Neuroinformatics·2026
Same journal

HESREN: A Derivative-Informed Reservoir Framework for Detecting Transient Neural Events and Windowless Estimation of Dynamic Functional Connectivity.

Neuroinformatics·2026
Same journal

Computational Morphometry of Peripheral Nerves: A Pipeline Perspective on Reproducibility and Generalization.

Neuroinformatics·2026
Same journal

Multimodal Branched Transport Infers Anatomically Aligned Brain Reaction Maps.

Neuroinformatics·2026
See all related articles

Neuroscience researchers can use a simpler semistructured data model for organized, machine-readable lab data. This approach avoids complex relational databases and the need for database professionals.

Area of Science:

  • Neuroscience
  • Bioinformatics
  • Data Management

Background:

  • Traditional relational database systems present significant complexity, hindering their adoption in neuroscience research.
  • A need exists for more accessible data management solutions tailored to the neuroscience community.

Purpose of the Study:

  • To propose a simpler semistructured data model as an alternative to complex relational databases for neuroscience data.
  • To facilitate organized, machine-readable, and network-accessible documentation of laboratory procedures and results.

Main Methods:

  • Development of a proof-of-concept software system.
  • Implementation of an HTML interface communicating with a remote semistructured database.
  • Exploration of standardized terminology and flexible data description systems.

Related Experiment Videos

Main Results:

  • Demonstration of a functional semistructured database system accessible via an HTML interface.
  • Validation of the semistructured model's ability to organize and format data effectively.
  • Highlighting the feasibility of researchers managing their own data without database experts.

Conclusions:

  • A semistructured data model offers a viable, less complex alternative for neuroscience data management.
  • Flexible data systems adaptable to evolving terminologies are crucial for long-term data utility.
  • Simplifying data documentation can increase the use of database technology in neuroscience.