Related Experiment Video
Updated: Aug 25, 2026

In vitro Organoid Culture of Primary Mouse Colon Tumors
Published on: May 17, 2013
Krüppel-like factor 4 is transactivated by butyrate in colon cancer cells
Zhi Yi Chen1, Sybille Rex, Chi-Chuan Tseng
1Section of Gastroenterology, VA Boston Healthcare System and Boston University School of Medicine, Boston, MA 02118, USA. zhiyi.chen@bmc.org
Abstract:
High-fiber diets decrease the incidence of colorectal cancers, and SCFA, derived from dietary fiber, are involved in the regulation of cell growth, differentiation, and apoptosis of the colonic epithelium. The mediators of these effects remain poorly defined. Krüppel-like factor-4 (KLF4/GKLF) is a zinc-finger transcription factor that exhibits some physiologic properties similar to those of SCFA in the colon. The present study was undertaken to examine the role of KLF4 in the butyrate-mediated effect in colon cancer HT-29 cells. Butyrate induced KLF4 mRNA expression and stimulated KLF4 promoter activity in a dose- and time-dependent manner in HT-29 cells. Similar effects were observed in SCFA possessing different carbon lengths (C3-C7), but not in branched isobutyric acid, indicating that the stimulatory properties of SCFA were related to fatty acid structure. Transfection studies using 5' deletion and mutant constructs of the KLF4 promoter demonstrated that the butyrate-responsive element was located at a putative stimulatory protein (Sp)1-binding site. Electrophoretic mobility shift assays using an oligonucleotide containing a consensus Sp1-binding element revealed a DNA-protein complex that was enhanced by butyrate treatment and supershifted by the Sp1 antiserum. Furthermore, the effects of butyrate on cell growth and KLF4 mRNA expression were the same as those of trichostatin A (TSA), a specific inhibitor of histone deacetylase (HDAC1). Overexpression of HDAC1 significantly attenuated transcriptional activation of the KLF4 promoter by butyrate or TSA. These results suggest that KLF4 may function as one of the downstream effectors of butyrate that mediates its growth arrest effect in the colon. Moreover, transactivation of KLF4 by butyrate appears to be mediated through interaction with a Sp1-binding domain on the promoter and is also likely to involve histone acetylation.
Insights
Dietary fiber
Area of Science:
- Molecular biology
- Cancer research
- Nutritional science
Background:
- High-fiber diets are linked to reduced colorectal cancer incidence.
- Short-chain fatty acids (SCFAs) from fiber regulate colon cell behavior.
- Mediators of SCFA effects on colonocytes are not fully understood.
Purpose of the Study:
- To investigate the role of Krüppel-like factor-4 (KLF4) in mediating butyrate effects.
- To elucidate the molecular mechanisms of KLF4 regulation by SCFAs in colon cancer cells.
Main Methods:
- Utilized HT-29 colon cancer cells.
- Analyzed KLF4 mRNA expression and promoter activity.
- Performed transfection studies with KLF4 promoter constructs.
- Conducted electrophoretic mobility shift assays (EMSAs).
- Investigated the role of histone deacetylase (HDAC) inhibition.
Main Results:
- Butyrate dose- and time-dependently induced KLF4 mRNA and promoter activity.
- SCFA structure influenced KLF4 induction; branched-chain fatty acids did not.
- Butyrate-responsive element identified at an Sp1-binding site on the KLF4 promoter.
- Butyrate enhanced Sp1 binding to the KLF4 promoter.
- Butyrate and trichostatin A (TSA, an HDAC inhibitor) showed similar effects on cell growth and KLF4 expression.
- HDAC1 overexpression attenuated butyrate- and TSA-induced KLF4 promoter activation.
Conclusions:
- KLF4 is a downstream effector of butyrate, mediating growth arrest in colon cancer cells.
- Butyrate transactivation of KLF4 involves Sp1 binding and histone acetylation.
- This study clarifies SCFA-mediated signaling pathways in colon cancer prevention.
Related Concept Videos
Renewal of Intestinal Stem Cells
Somatic to iPS Cell Reprogramming
Role Of Notch Signalling In Intestinal Stem Cell Renewal
Direct cell-to-cell contact is needed for the activation of Notch signaling. The signal is initiated when a notch ligand binds to a receptor on an adjacent cell, also...
Abnormal Proliferation
mTOR Signaling and Cancer Progression
The mTOR pathway or the...
Functions of the Gut Microbiota

