Genotypic resistance and HIV-1 subtype in Brazilian children on dual and triple combination therapy
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Updated: Aug 24, 2026

An Affordable HIV-1 Drug Resistance Monitoring Method for Resource Limited Settings
Published on: March 30, 2014
Elizabeth S Machado1, John S Lambert, Douglas C Watson
1Serviço de Doenças Infecciosas e Parasitárias, Hospital Universitário Clementino Fraga Filho, Rio de Janeiro, Brazil. emachado@biologia.ufrj.br
Insights
Previous antiretroviral (ARV) use in HIV-infected children is linked to increased drug resistance and poorer immune recovery. Triple therapy is recommended as the preferred first-line regimen for children in Brazil.
Area of Science:
- Pediatric infectious diseases
- HIV/AIDS research
- Virology
Background:
- Antiretroviral therapy (ART) is crucial for HIV-infected individuals, with Brazilian guidelines recommending dual or triple therapy for children.
- Efficacy of ART can be compromised by drug-resistant strains and poor adherence.
- Understanding treatment history's impact on resistance and immune response is vital for optimizing pediatric HIV care.
Purpose of the Study:
- To investigate the relationship between RNA levels, CD4+ T-cell counts, treatment history, and drug-resistant variants in HIV-1-infected children in Rio de Janeiro.
- To assess virologic and immunological responses to ART based on treatment history and drug resistance.
Main Methods:
- Direct sequencing of reverse transcriptase and protease genes from plasma samples.
- Monitoring changes in HIV-1 RNA levels and CD4+ T-cell counts from baseline to assess treatment response.
- Categorizing patients based on dual or triple therapy regimens and antiretroviral history.
Main Results:
- Patients with prior antiretroviral (ARV) exposure showed higher frequencies of drug-resistance mutations and cross-resistance.
- Antiretroviral-naïve subjects exhibited greater increases in CD4+ T-cell counts and lower viral loads.
- Non-B HIV subtypes were associated with a smaller increase in CD4+ T-cell counts compared to B-subtypes.
Conclusions:
- Previous ARV use in HIV-infected Brazilian children is associated with reduced immunological recovery and increased drug resistance mutations due to prolonged drug selective pressure.
- These findings support the preferential use of triple drug combination therapy as a first-line regimen for children.
- Optimizing first-line ART regimens is critical for improving long-term outcomes in pediatric HIV infection.
Background:
Antiretroviral therapy is provided by the Brazilian Ministry of Health to eligible HIV-infected individuals. Based on clinical and immunological classification, the Brazilian guidelines recommend dual or triple therapy for children. However, the development of drug-resistant strains or poor adherence to therapy could impact the efficacy of this approach.
Objectives:
We examined relationships between RNA levels, CD4+ T-cell counts, treatment history, and the prevalence of drug-resistant variants in a cohort of HIV-1-infected children in Rio de Janeiro, Brazil.
Study Design:
Direct sequencing of reverse transcriptase and protease genes from plasma was performed. Virologic and CD4+ T-cell counts responses to therapy were assessed by changes in HIV-1 RNA levels and CD4+ T-cell counts from baseline.
Results:
Thirty-seven patients were receiving dual therapy and 38 were on triple therapy at enrollment, segregated by antiretroviral history. Both groups had a higher increase in CD4+ T cell counts and a lower viral load in pre-treatment antiretroviral-naïve subjects. Notably, there was a direct correlation between the higher frequencies of drug-resistance mutations and cross-resistance with previous usage of antiretroviral (ARV) therapy in both groups. Non-B subtypes isolates were found in 21.3% of samples. A smaller increase in CD4+ T cell counts was found between non-B subtypes when compared to B-subtypes.
Conclusions:
These results suggest that less immunological recovery and a higher number of mutations related to drug resistance were associated with previous usage of ARV and consequent higher time under drug selective pressure in these HIV-infected Brazilian children. These facts suggest the preferential use of triple drug combination as first line regimen in children.
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