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Assessment of Selective mRNA Translation in Mammalian Cells by Polysome Profiling
Published on: October 28, 2014
The Apc5 subunit of the anaphase-promoting complex/cyclosome interacts with poly(A) binding protein and represses
Nadejda Koloteva-Levine1, Dalia Pinchasi, Idan Pereman
1Department of Cell Research & Immunology, George S. Wise Faculty of Life Science, Tel Aviv University, Tel Aviv, Israel.
Abstract:
The anaphase-promoting complex/cyclosome (APC/C) is a multisubunit ubiquitin ligase that mediates the proteolysis of cell cycle proteins in mitosis and G(1). We used a yeast three-hybrid screen to identify proteins that interact with the internal ribosome entry site (IRES) of platelet-derived growth factor 2 mRNA. Surprisingly, this screen identified Apc5, although it does not harbor a classical RNA binding domain. We found that Apc5 binds the poly(A) binding protein (PABP), which directly binds the IRES element. PABP was found to enhance IRES-mediated translation, whereas Apc5 overexpression counteracted this effect. In addition to its association with the APC/C complex, Apc5 binds much heavier complexes and cosediments with the ribosomal fraction. In contrast to Apc3, which is associated only with the APC/C and remains intact during differentiation, Apc5 is degraded upon megakaryocytic differentiation in correlation with IRES activation. Expression of Apc5 in differentiated cells abolished IRES activation. This is the first report implying an additional role for an APC/C subunit, apart from its being part of the APC/C complex.
Insights
Apc5, an anaphase-promoting complex/cyclosome (APC/C) subunit, unexpectedly binds mRNA IRES elements via PABP. Apc5 regulates IRES translation and is degraded during differentiation, suggesting a novel role beyond the APC/C complex.
Area of Science:
- Molecular Biology
- Cell Biology
- Biochemistry
Background:
- The anaphase-promoting complex/cyclosome (APC/C) is a crucial E3 ubiquitin ligase regulating cell cycle progression through proteolysis.
- Internal ribosome entry site (IRES) elements facilitate cap-independent translation initiation, particularly under stress conditions.
Purpose of the Study:
- To identify proteins interacting with the platelet-derived growth factor 2 mRNA IRES.
- To investigate the novel function of APC/C subunit Apc5 in translation regulation.
Main Methods:
- Yeast three-hybrid screening to identify IRES-interacting proteins.
- Co-immunoprecipitation and Western blotting to confirm protein interactions.
- Analysis of IRES-mediated translation efficiency and protein degradation during megakaryocytic differentiation.
Main Results:
- Apc5 was identified as an IRES-interacting protein, binding PABP which directly interacts with the IRES.
- Apc5 overexpression inhibited PABP-enhanced IRES-mediated translation.
- Apc5, unlike Apc3, is degraded during megakaryocytic differentiation, correlating with IRES activation.
- Apc5 expression in differentiated cells repressed IRES activation.
Conclusions:
- Apc5 possesses a novel function in regulating IRES-mediated translation, independent of its role in the APC/C complex.
- The interaction of Apc5 with the IRES-PABP complex highlights a new layer of translational control.
- Apc5 degradation during differentiation is linked to the activation of specific IRES elements.
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