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Light-mediated Reversible Modulation of the Mitogen-activated Protein Kinase Pathway during Cell Differentiation and Xenopus Embryonic Development
Published on: June 15, 2017
The transcriptional response to Raf activation is almost completely dependent on Mitogen-activated Protein Kinase
Almut Schulze1, Barbara Nicke, Patricia H Warne
1Gene Expression Analysis, Cancer Research UK London Research Institute, London WC2A 3PX, United Kingdom. almut.schulze@cancer.org.uk
Abstract:
The Raf protein kinases are major effectors of Ras GTPases and key components of the transcriptional response to serum factors, acting at least in part through the extracellular signal-regulated kinase/mitogen-activated protein kinase pathway. It has recently been suggested that Raf also may trigger other as yet uncharacterized signaling pathways. Here, we have used cDNA microarrays to dissect changes in gene expression induced by activation of inducible c-Raf-1 constructs in human mammary epithelial and ovarian epithelial cells. The majority of Raf-induced transcriptional responses are shown to be blocked by pharmacological inhibition of the Raf substrate mitogen-activated protein kinase kinase, indicating that potential mitogen-activated protein kinase kinase-independent Raf signaling pathways have no significant influence on gene expression. In addition, we used epidermal growth factor receptor inhibitory drugs to address the contribution of autocrine signaling by Raf-induced EGF family proteins to the Raf transcriptional response. At least one-half of the transcription induced by Raf activation requires epidermal growth factor (EGF) receptor function The EGF receptor-independent component of the Raf transcriptional response is entirely up-regulation of gene expression, whereas the EGF receptor-dependent component is an equal mixture of up- and down-regulation. The use of transcriptional profiling in this way allows detailed analysis of the architecture of signaling pathways to be undertaken.
Insights
Raf protein kinases primarily signal through the mitogen-activated protein kinase pathway, with minimal evidence for independent gene expression effects. Epidermal growth factor receptor signaling significantly contributes to Raf-induced transcriptional changes.
Area of Science:
- Cellular signaling pathways
- Molecular biology
- Gene expression analysis
Background:
- Raf protein kinases are key effectors of Ras GTPases and involved in transcriptional responses.
- Potential for Raf to activate uncharacterized signaling pathways beyond the known ERK/MAPK pathway has been proposed.
Purpose of the Study:
- To investigate gene expression changes induced by c-Raf-1 activation in human epithelial cells.
- To determine the contribution of MAPK and EGF receptor signaling to Raf-induced transcriptional responses.
Main Methods:
- Utilized cDNA microarrays to profile gene expression changes.
- Employed pharmacological inhibition of mitogen-activated protein kinase kinase (MEK).
- Used epidermal growth factor receptor (EGFR) inhibitory drugs to assess autocrine signaling.
Main Results:
- The majority of Raf-induced transcriptional changes are dependent on mitogen-activated protein kinase kinase (MEK).
- MEK-independent Raf signaling pathways have no significant impact on gene expression.
- Approximately half of the transcription induced by Raf activation requires epidermal growth factor (EGF) receptor function.
- EGF receptor-independent responses involve only gene upregulation, while EGF receptor-dependent responses include both up- and down-regulation.
Conclusions:
- Raf-induced transcriptional responses are largely mediated through the MAPK pathway.
- Autocrine signaling via EGF receptor plays a significant role in Raf's transcriptional effects.
- Transcriptional profiling provides a detailed method for analyzing signaling pathway architecture.
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