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Assays for Validating Histone Acetyltransferase Inhibitors
Published on: August 6, 2020
Histone deacetylase inhibitors activate INK4d gene through Sp1 site in its promoter
Tomoya Yokota1, Youichirou Matsuzaki, Kazuhiro Miyazawa
1Department of Molecular-Targeting Cancer Prevention, Graduate School of Medical Science, Kyoto Prefectural University of Medicine, Kawaramachi-Hirokoji, Kamigyo-ku, Kyoto 602-8566, Japan.
Abstract:
Histone deacetylase (HDAC) inhibitors are known to arrest human tumor cells at the G1 phase of the cell cycle and activate the cyclin-dependent kinase inhibitor, p21(WAF1/Cip1). However, several studies have suggested the existence of a p21(WAF1/Cip1)-independent molecular pathway. We report here that HDAC inhibitors activate a member of the INK4 family, the INK4d gene, causing G1 phase arrest, in the human T cell leukemia cell line, Jurkat. One of the major Trichostatin A (TSA)-responsive elements is a specific Sp1 binding site in the INK4d promoter. Electrophoretic mobility-shift assay revealed that Sp1 and Sp3 can specifically interact with this Sp1 binding site. Furthermore, using chromatin immunoprecipitation assay, we demonstrated that HDAC2 was present in the INK4d proximal promoter region in the absence, but not the presence, of TSA. Taken together, these results suggest that treatment with TSA transcriptionally activates INK4d by releasing HDAC2 from the histone-DNA complex at the INK4d promoter. Using a p21(WAF1/Cip1)-deleted human colorectal carcinoma cell line, HCT116 p21 (-/-), we show that upregulation of p19(INK4d) by TSA is associated with inhibition of cell proliferation. Moreover, mouse embryo fibroblasts lacking Ink4d were resistant to the growth inhibitory effects of TSA as compared to their wild-type counterpart. Our findings suggest that p19(INK4d) in addition to p21(WAF1/Cip1) is an important molecular target of HDAC inhibitors inducing growth arrest.
Insights
Histone deacetylase (HDAC) inhibitors activate the INK4d gene, causing cell cycle arrest independently of p21(WAF1/Cip1). This pathway involves HDAC2 release from the INK4d promoter, highlighting INK4d as a key target for HDAC inhibitors in cancer therapy.
Area of Science:
- Molecular Biology
- Cancer Research
- Epigenetics
Background:
- Histone deacetylase (HDAC) inhibitors induce cell cycle arrest, primarily through p21(WAF1/Cip1) activation.
- Evidence suggests alternative p21(WAF1/Cip1)-independent pathways mediate HDAC inhibitor effects.
Purpose of the Study:
- To investigate the role of the INK4d gene in HDAC inhibitor-induced cell cycle arrest.
- To elucidate the molecular mechanism of INK4d activation by HDAC inhibitors.
Main Methods:
- Utilized Jurkat and HCT116 p21(-/-) cell lines.
- Employed electrophoretic mobility-shift assay (EMSA) and chromatin immunoprecipitation (ChIP) assay.
- Investigated TSA-responsive elements in the INK4d promoter.
Main Results:
- HDAC inhibitors, specifically Trichostatin A (TSA), activate the INK4d gene, leading to G1 phase arrest.
- TSA treatment releases HDAC2 from the INK4d promoter, suggesting transcriptional activation.
- p19(INK4d) upregulation by TSA inhibits cell proliferation, and its absence confers resistance to TSA's growth inhibitory effects.
Conclusions:
- p19(INK4d) is a crucial mediator of HDAC inhibitor-induced growth arrest, functioning independently of p21(WAF1/Cip1).
- The INK4d gene represents a significant molecular target for HDAC inhibitors in cancer treatment strategies.
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