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Mini-F plasmid mutants able to replicate in Escherichia coli deficient in the DnaJ heat shock protein
1Institute for Virus Research, Kyoto University, Japan.
Abstract:
A subset of Escherichia coli heat shock proteins, DnaJ, DnaK, and GrpE, is required for mini-F plasmid replication, presumably at the step of functioning of the RepE initiator protein. We have isolated and characterized mini-F plasmid mutants that acquired the ability to replicate in the Escherichia coli dnaJ259. The mutant plasmids were found to replicate in any of dnaJ, dnaK, and grpE mutant hosts tested. In each case, the majority of the mutant plasmids carried a unique amino acid alteration in a localized region of repE coding sequence and showed an increased copy number, whereas the minority contained a common single base change (C to T) in the promoter/operator region and produced an increased amount of RepE. All RepE proteins with altered residues (between 92 and 134) exhibited increased initiator activities (hyperactive), and many showed reduced repressor activities as well, indicating that this region is important for the both major functions of RepE protein. These results together with evidence reported elsewhere indicate that the subset of heat shock proteins serves to activate RepE protein prior to or during its binding to the replication origin and that the mutant RepE proteins are active even in their absence. We also found that a C-terminal lesion (repE602) reduces the initiator activity particularly of some hyperactive mutant RepE proteins but does not affect the repressor activity. This finding suggests a functional interaction between the central and C-terminal regions of RepE in carrying out the initiator function.
Insights
Mutant mini-F plasmids with altered RepE initiator proteins can replicate independently of essential Escherichia coli heat shock proteins (DnaJ, DnaK, GrpE). These RepE mutations enhance DNA replication initiation.
Area of Science:
- Molecular Biology
- Bacterial Genetics
- Protein Function
Background:
- Escherichia coli heat shock proteins (DnaJ, DnaK, GrpE) are crucial for mini-F plasmid replication, particularly involving the RepE initiator protein.
- Understanding the interaction between heat shock proteins and RepE is key to elucidating plasmid replication mechanisms.
Purpose of the Study:
- To isolate and characterize mini-F plasmid mutants capable of replicating in heat shock protein-deficient Escherichia coli.
- To investigate the functional alterations in the RepE protein and its regulatory regions.
Main Methods:
- Isolation and characterization of mini-F plasmid mutants.
- Replication assays in various Escherichia coli heat shock mutant strains (dnaJ, dnaK, grpE).
- DNA sequencing to identify mutations in the repE gene and its regulatory regions.
Main Results:
- Mutant plasmids replicated in dnaJ, dnaK, and grpE mutant hosts.
- Most mutants had amino acid alterations in the RepE protein (residues 92-134), leading to hyperactive initiator function and often reduced repressor activity.
- A minority of mutants had a promoter mutation increasing RepE production.
- A C-terminal lesion (repE602) reduced initiator activity of some mutants without affecting repressor activity.
Conclusions:
- The identified RepE mutations confer replication independence from specific heat shock proteins.
- The central region of RepE (residues 92-134) is critical for both initiator and repressor functions.
- Functional interaction exists between the central and C-terminal regions of RepE for initiator activity.