Endogenous DNA damage in humans: a review of quantitative data
Related Experiment Video
Updated: Aug 24, 2026

Proximity Ligand Assay to Localize Proteins in DNA Damage Sites
Published on: August 2, 2024
Rinne De Bont1, Nik van Larebeke
1Study Centre for Carcinogenesis and Primary Prevention of Cancer, Department of Radiotherapy, Nuclear Medicine and Experimental Cancerology, Ghent University, Universitair ziekenhuis 4K3, De Pintelaan 185, B9000 Gent, Belgium.
Abstract:
DNA damage plays a major role in mutagenesis, carcinogenesis and ageing. The vast majority of mutations in human tissues are certainly of endogenous origin. A thorough knowledge of the types and prevalence of endogenous DNA damage is thus essential for an understanding of the interactions of endogenous processes with exogenous agents and the influence of damage of endogenous origin on the induction of cancer and other diseases. In particular, this seems important in risk evaluation concerning exogenous agents that also occur endogenously or that, although chemically different from endogenous ones, generate the same DNA adducts. This knowledge may also be crucial to the development of rational chemopreventive strategies. A list of endogenous DNA-damaging agents, processes and DNA adduct levels is presented. For the sake of comparison, DNA adduct levels are expressed in a standardized way, including the number of adducts per 10(6) nt. This list comprises numerous reactive oxygen species and products generated as a consequence (e.g. lipid peroxides), endogenous reactive chemicals (e.g. aldehydes and S-adenosylmethionine), and chemical DNA instability (e.g. depurination). The respective roles of endogenous versus exogenous DNA damage in carcinogenesis are discussed.
Insights
Endogenous DNA damage, originating from within the body, significantly contributes to mutations, cancer, and aging. Understanding these internal damage sources is crucial for evaluating risks from external factors and developing preventative strategies.
Area of Science:
- Biochemistry
- Molecular Biology
- Genetics
Background:
- DNA damage is a critical factor in mutagenesis, carcinogenesis, and aging.
- The majority of mutations in human tissues arise from endogenous sources.
- Understanding endogenous DNA damage is essential for assessing interactions with exogenous agents and disease induction.
Purpose of the Study:
- To compile and present a comprehensive list of endogenous DNA-damaging agents, processes, and their associated DNA adduct levels.
- To standardize DNA adduct levels for comparison (adducts per 10^6 nucleotides).
- To discuss the relative contributions of endogenous and exogenous DNA damage in carcinogenesis.
Main Methods:
- Literature review and data compilation of endogenous DNA-damaging agents and processes.
- Standardized quantification of DNA adduct levels.
- Comparative analysis of endogenous and exogenous DNA damage roles.
Main Results:
- Identified numerous endogenous DNA-damaging agents, including reactive oxygen species, lipid peroxides, aldehydes, S-adenosylmethionine, and depurination.
- Presented standardized DNA adduct levels for various endogenous damaging agents.
- Discussed the significance of endogenous DNA damage in the context of exogenous agents and cancer development.
Conclusions:
- Endogenous DNA damage is a major contributor to mutations and disease, necessitating thorough understanding.
- Standardized data on endogenous DNA damage aids in risk assessment and the development of chemopreventive strategies.
- Knowledge of endogenous DNA damage is vital for distinguishing its role from exogenous factors in carcinogenesis.
Related Concept Videos
Nucleotide Excision Repair
Cells are regularly exposed to mutagens—factors in the environment that can damage DNA and generate mutations. UV radiation is one of the most common mutagens and is estimated to introduce a significant number of changes in DNA. These include bends or kinks in the structure, which can block DNA replication or transcription. If these errors are not fixed, the damage can cause mutations, which in turn can result in cancer or disease depending on which sequences are...
Nucleotide Excision Repair
Overview of DNA Repair
Chemically...
Overview of DNA Repair
Chemically...
DNA Damage can Stall the Cell Cycle
Mutations
Chromosomal Alterations Are Large-Scale Mutations
While point mutations are changes in a single nucleotide in...
