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Related Experiment Videos

TAD: a web interface and database for tissue microarrays.

Kevin R Coombes1, Lin Zhang, Carlos Bueso-Ramos

  • 1Department of Biostatistics, The University of Texas MD Anderson Cancer Center, Houston TX 77030, USA. krc@odin.mdacc.tmc.edu

Applied Bioinformatics
|May 8, 2004
PubMed
Summary
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Tissue microarrays (TMA) streamline pathology lab work. A new tool, TAD, automates score recording and links it to clinical data for easier interpretation, improving high-throughput analysis.

Area of Science:

  • Pathology
  • Bioinformatics
  • Medical Informatics

Background:

  • Tissue microarrays (TMAs) are vital high-throughput tools in modern pathology.
  • Manual scoring and data recording for TMAs are time-consuming and prone to errors.

Purpose of the Study:

  • To introduce TAD, an open-source application for automating TMA score recording.
  • To enhance the integration of TMA data with clinical information for improved interpretation.

Main Methods:

  • Development of an Active Server Page web interface.
  • Implementation of a relational database for data storage.
  • Automation of score recording and linkage to clinical data.

Main Results:

  • TAD provides an automated system for managing TMA data.

Related Experiment Videos

  • The application facilitates efficient linking of pathology scores with clinical data.
  • TAD can be installed locally for secure, private use.

    • Conclusions:

    • TAD offers a solution to automate manual processes in TMA analysis.
    • This tool improves data management and interpretation in pathology laboratories.
    • The open-source nature of TAD promotes accessibility and further development.