Related Experiment Video
Updated: Aug 24, 2026

Detection and Isolation of Apoptotic Bodies to High Purity
Published on: August 12, 2018
Apoptosis: an optimization approach
Michael A Khanin1, Aleksey N Lobanov, Scott H Kaufmann
1Mathematical Modeling Laboratory, Center for Theoretical Problems of Pharmacology, Russian Academy of Sciences, Marshal Konev Str. 16/34, Moscow 23060, Russia. khanin@softel.ru
Abstract:
The present study examined the levels of procaspases (zymogens of the main apoptosis enzymes, caspases) that are predicted based on application of the optimization principle. Optimization models have previously been successfully developed for many other physiological systems (e.g., circulation, oxygen transport system, fibrinolysis, and blood coagulation) but have not previously been applied to apoptotic biochemical pathways. Our model assumed that apoptotic pathways are designed to minimize protein consumption. Procaspase concentrations were predicted based on this assumption, along with known schemes of apoptosis reactions and kinetic constants for procaspase activation and target cleavage. Good agreement between the model predictions and actual procaspase levels was observed.
Related Concept Videos
Apoptosis
Autophagic Cell Death
Autophagy and Apoptosis
Autophagy can activate apoptosis. In normal conditions, the autophagy activating protein Beclin-1 and pro-apoptotic...
Cellular Injury V: Apoptosis and Autophagy
The Intrinsic Apoptotic Pathway
Overview of Cell Death
Cell death was observed in the early 19th century, but there was no experimental evidence to prove it. In 1842, Carl Vogt first discovered cell death in a metamorphic toad; however, it was not termed ‘cell death.’ Scientists discovered different cell death pathways only in the 20th century...
The Extrinsic Apoptotic Pathway

