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Updated: Aug 24, 2026

Live-Cell Forward Genetic Approach to Identify and Isolate Developmental Mutants in Chlamydia trachomatis
Published on: June 10, 2020
Cleavage-dependent activation of a chlamydia-secreted protease
Feng Dong1, Mustak Pirbhai, Youmin Zhong
1Department of Microbiology and Immunology, University of Texas Health Science Center at San Antonio, 7703 Floyd Curl Drive, San Antonio, TX 78229, USA.
Abstract:
A chlamydia-secreted protein designated CPAF (chlamydial proteasome-like activity factor) was shown previously to degrade host transcriptional factors (e.g. RFX5) required for major histocompatibility (MHC) gene activation. Although CPAF is encoded by a single open reading frame (ORF) in the chlamydial genome, two fragments designated CPAFn and CPAFc were the main products purified. The current study was designed to test whether cleavage of CPAF into CPAFn and CPAFc is a physiological process required for CPAF proteolytic activity. Pulse-chase experiments revealed that CPAF was initially synthesized in chlamydia-infected cells as a 70 kDa full-length protein and rapidly cleaved into CPAFn and c fragments. Full-length CPAF expressed via a transgene in mammalian cells remained uncleaved and had no proteolytic activity, whereas CPAF expressed in Escherichia coli cells was processed and possessed RFX5 degradation activity. CPAF mutants deficient in processing even when expressed by E. coli failed to degrade RFX5. More importantly, the RFX5 degradation activity was partially restored when the mutant CPAF was artificially induced to undergo cleavage. These observations together have demonstrated that cleavage of CPAF is both necessary and sufficient for CPAF activity.
Insights
Chlamydia-secreted protein CPAF (chlamydial proteasome-like activity factor) must be cleaved into fragments to degrade host RFX5, which is essential for MHC gene activation. This cleavage is necessary and sufficient for CPAF
Area of Science:
- Microbiology
- Molecular Biology
- Immunology
Background:
- Chlamydia-secreted protein CPAF degrades host transcriptional factors like RFX5.
- RFX5 is crucial for activating major histocompatibility (MHC) gene expression.
- CPAF is encoded by a single ORF but purified as two fragments: CPAFn and CPAFc.
Purpose of the Study:
- To determine if CPAF cleavage is a physiological requirement for its proteolytic activity.
- To investigate the role of CPAF processing in the degradation of host factors.
Main Methods:
- Pulse-chase experiments in infected cells.
- Expression of full-length CPAF and mutants in mammalian cells and E. coli.
- Assessing RFX5 degradation activity of processed and unprocessed CPAF.
Main Results:
- CPAF is synthesized as a 70 kDa protein and rapidly cleaved into CPAFn and CPAFc in infected cells.
- Full-length CPAF expressed in mammalian cells remained uncleaved and inactive.
- Processed CPAF from E. coli degraded RFX5, while unprocessed mutants did not.
- Partial restoration of RFX5 degradation activity was observed upon artificial cleavage induction in mutants.
Conclusions:
- CPAF cleavage into CPAFn and CPAFc is a necessary and sufficient step for its proteolytic activity.
- This processing is critical for CPAF's ability to degrade host RFX5 and impact MHC gene activation.
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