Related Experiment Video
Updated: Aug 24, 2026

Yeast As a Chassis for Developing Functional Assays to Study Human P53
Published on: August 4, 2019
Alteration of the p14(ARF) gene and p53 status in human hepatocellular carcinomas
Teruaki Ito1, Naoshi Nishida, Yoshihiro Fukuda
1Department of Medicine and Clinical Science, Kyoto University Graduate School of Medicine, 54 Kawahara-cho, Shogoin, Sakyo-ku, Kyoto 606-8507, Japan.
Background:
The INK4a/ARF locus encodes p16INK4a and p14ARF, both of which are crucial for two tumor suppressor pathways, retinoblastoma (RB)/p16INK4a and p53/ARF. Inactivation of RB/p16INK4a was frequently reported, but alterations of the p14ARF gene in hepatocellular carcinoma (HCC) in the Japanese population have been insufficiently analyzed.
Methods:
To determine the role of p53/ARF alteration in hepatocarcinogenesis, we examined 44 HCCs for mRNA expression, deletion, mutation, and promoter hypermethylation of the p14(ARF) gene; alterations of p53 were also analyzed in the same series of HCCs.
Results:
Homozygous deletion, spanning from exon 1 beta to exon 2, was found in 1 HCC mutations within exon 2 were found in 2 HCCs, but no promoter hypermethylation was detected. All 3 HCCs with p14(ARF) alteration were well differentiated. Twelve of the 44 HCCs (27.2%) showed immunohistochemical evidence of p53 alteration; however, only 1 of the tumors with p53 alteration was well differentiated. TaqMan polymarase chain reaction (PCR) indicated that the expression of p14(ARF) in HCCs was higher than in that in all but three of the corresponding non-tumorous tissues ( P < 0.0001), and increased expression of p14(ARF) seemed to be associated with poorly differentiated phenotype. Absence of p14(ARF) expression was seen in only one HCC, with homozygous deletion of the p14(ARF) gene.
Conclusions:
Compared with p53 alteration, p14(ARF) alteration does not occur frequently, but may play a role in a subset of Japanese HCCs in the early stage of hepatocarcinogenesis. On the other hand, overexpression of p14(ARF) was frequently observed in HCC, especially in poorly differentiated tumors, probably reflecting oncogenic stimuli in these tumors. The INK4a/ARF locus encodes p16(INK4a) and p14(ARF), both of which are crucial for two tumor suppressor pathways, retinoblastoma (RB)/p16(INK4a) and p53/ARF. Inactivation of RB/p16(INK4a) was frequently reported, but alterations of the p14(ARF) gene in hepatocellular carcinoma (HCC) in the Japanese population have been insufficiently analyzed.
Insights
Alterations in the p14ARF gene are infrequent in Japanese hepatocellular carcinoma (HCC) but may contribute to early tumor development. Overexpression of p14ARF is common, particularly in poorly differentiated HCC.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- The INK4a/ARF locus encodes tumor suppressors p16INK4a and p14ARF, critical for cell cycle regulation.
- While RB/p16INK4a pathway alterations are common in hepatocellular carcinoma (HCC), p14ARF gene alterations in Japanese HCC remain under-investigated.
Purpose of the Study:
- To investigate the role of p53/ARF pathway alterations in hepatocarcinogenesis.
- To analyze p14ARF gene alterations (mRNA expression, deletion, mutation, methylation) and p53 alterations in Japanese HCC.
Main Methods:
- Analysis of 44 HCC samples for p14ARF mRNA expression, deletion, mutation, and promoter hypermethylation.
- Simultaneous analysis of p53 alterations in the same HCC cohort.
- Immunohistochemistry and TaqMan PCR were employed for expression and alteration analysis.
Main Results:
- p14ARF alterations (homozygous deletion, mutation) were found in 3/44 HCCs, predominantly well-differentiated.
- p53 alterations were observed in 12/44 HCCs, with only one being well-differentiated.
- p14ARF expression was significantly higher in HCC than non-tumorous tissues (P < 0.0001), correlating with poor differentiation.
Conclusions:
- p14ARF alterations are infrequent in Japanese HCC but may play a role in early hepatocarcinogenesis.
- Overexpression of p14ARF is frequently observed in HCC, especially in poorly differentiated tumors, suggesting a response to oncogenic stimuli.
- The study highlights the distinct roles of p14ARF and p53 alterations in HCC development.
Related Concept Videos
Abnormal Proliferation
DNA Damage can Stall the Cell Cycle
DNA Damage Can Stall the Cell Cycle
The Ras Gene
Ras is a superfamily...
The Retinoblastoma Gene
The first-ever tumor suppressor gene called Rb was identified in retinoblastoma - a rare eye tumor in children. In inherited forms of the disease, a child inherits one defective copy of the Rb gene, which predisposes them to retinoblastoma. However,...
Negative Regulator Molecules

