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Published on: May 26, 2026
Characterization of Neisseria meningitidis isolates collected from 1974 to 2003 in Japan by multilocus sequence
Hideyuki Takahashi1, Toshiro Kuroki1, Yuko Watanabe1
1Department of Bacteriology, National Institute of Infectious Diseases, Tokyo, Japan 2Department of Microbiology, Kanagawa Prefectural Public Health Laboratory, Chigasaki, Japan 3Department of Bacteriology, Ehime Prefectural Institute of Public Health and Environmental Science, Matsuyama, Japan.
Abstract:
Analysis of 182 Neisseria meningitidis strains isolated over the past 30 years in Japan by serogroup typing and multilocus sequence typing (MLST) was performed. The serogroups of the 182 Japanese isolates were B (103 isolates), Y (39), W135 (1) and non-groupable (39). By MLST analysis, 65 different sequence types (ST) were identified, 42 of which were not found in the MLST database as of January 2004 and seemed to be unique to Japan. Statistical analysis of the MLST results revealed that, although the Japanese isolates seemed to be genetically divergent, they were classified into six major clonal complexes and other minor complexes. Among these isolates, well-documented ST complexes found worldwide were present, such as ST-23 complex (49 isolates), ST-44 complex (41 isolates) and ST-32 complex (8 isolates). On the other hand, a new clonal complex designated ST-2046 complex (28 isolates), which has not been identified in other countries, was also found, suggesting that this clone was indigenous to Japan. Taken together, it was speculated that meningococcal isolates in Japan comprised heterogeneous clones, which were derived both from clones identified in other countries and clones unique to Japan.
Insights
Japanese Neisseria meningitidis strains show genetic diversity, with some common globally and others unique to Japan. This suggests a mix of international and indigenous clones circulating in Japan.
Area of Science:
- Microbiology
- Genetics
- Epidemiology
Background:
- Neisseria meningitidis causes meningitis and sepsis globally.
- Understanding the genetic diversity of meningococcal isolates is crucial for disease control and prevention.
Purpose of the Study:
- To analyze the genetic characteristics of Neisseria meningitidis strains isolated in Japan over 30 years.
- To identify global and Japan-specific genetic lineages of Neisseria meningitidis.
Main Methods:
- Serogroup typing of 182 Neisseria meningitidis isolates.
- Multilocus Sequence Typing (MLST) to determine sequence types (STs) and clonal complexes.
- Comparison of identified STs with the global MLST database.
Main Results:
- Serogroup B was predominant (103 isolates), followed by Y (39) and W135 (1).
- 65 different sequence types (STs) were identified, with 42 unique to Japan.
- Japanese isolates clustered into six major clonal complexes, including globally prevalent ones (ST-23, ST-44, ST-32) and a novel indigenous complex (ST-2046).
Conclusions:
- Neisseria meningitidis isolates in Japan exhibit significant genetic heterogeneity.
- The meningococcal population in Japan comprises both internationally disseminated clones and unique indigenous lineages.
- This genetic diversity has implications for surveillance and the development of targeted interventions.
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