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Updated: Aug 24, 2026

Analysis of Cell Cycle Position in Mammalian Cells
Published on: January 21, 2012
Human RAD9 checkpoint control/proapoptotic protein can activate transcription of p21
Yuxin Yin1, Aiping Zhu, Yan J Jin
1Center for Radiological Research, Department of Radiation Oncology, College of Physicians and Surgeons, Columbia University, 630 West 168th Street, New York, NY 10032, USA.
Abstract:
When human cells incur DNA damage, two fundamental responses can follow, cell cycle arrest or apoptosis. Human RAD9 (hRAD9) and p53 function in both processes, but the mechanistic relationship between their activities is unknown. p53 mediates checkpoint control at G(1) by transcriptional regulation of p21. In this report, we show that hRAD9, like p53, can also regulate p21 at the transcriptional level. We demonstrate that overexpression of hRAD9 leads to increased p21 RNA and encoded protein levels. The promoter region of p21 fused to a luciferase reporter can be transactivated by either hRAD9 or p53, indicating that hRAD9 regulates the p21 promoter for transcriptional control of expression. Using an electrophoretic mobility-shift assay, we show that hRAD9 specifically binds to a p53-consensus DNA-binding sequence in the p21 promoter. Microarray screening coupled with Northern analysis reveals that hRAD9 regulates the abundance of other messages in addition to p21. Our data reveal a previously undescribed mechanism for regulation of p21 and demonstrate that hRAD9 can control gene transcription. We suggest that hRAD9 and p53 co-regulate p21 to direct cell cycle progression by similar molecular mechanisms. Furthermore, hRAD9 might regulate other cellular processes as well by modulating transcription of multiple down-stream target genes.
Insights
Human RAD9 (hRAD9) and p53 both regulate cell cycle arrest and apoptosis. This study reveals hRAD9 transcriptionally controls p21, similar to p53, impacting cell cycle progression.
Area of Science:
- Molecular Biology
- Cell Biology
- Genetics
Background:
- DNA damage triggers cell cycle arrest or apoptosis.
- Human RAD9 (hRAD9) and p53 are involved in these responses.
- The mechanistic link between hRAD9 and p53 activities is unclear.
Purpose of the Study:
- To investigate the mechanistic relationship between hRAD9 and p53 in DNA damage response.
- To determine if hRAD9 regulates p21 transcription.
Main Methods:
- Luciferase reporter assays to assess promoter activity.
- Electrophoretic mobility-shift assays (EMSA) to study DNA binding.
- Microarray and Northern blot analyses to examine gene expression.
Main Results:
- hRAD9 overexpression increases p21 RNA and protein levels.
- hRAD9 transactivates the p21 promoter, similar to p53.
- hRAD9 binds to a p53-consensus sequence in the p21 promoter.
- hRAD9 influences the transcription of multiple genes beyond p21.
Conclusions:
- hRAD9 regulates p21 at the transcriptional level, revealing a new regulatory mechanism.
- hRAD9 and p53 likely co-regulate p21 via similar molecular pathways.
- hRAD9 may control various cellular processes by modulating downstream gene transcription.
Related Concept Videos
Negative Regulator Molecules
Abnormal Proliferation
DNA Damage can Stall the Cell Cycle
DNA Damage Can Stall the Cell Cycle
Inhibition of Cdk Activity
The Intrinsic Apoptotic Pathway

