Related Experiment Video
Updated: Aug 24, 2026

Artificial RNA Polymerase II Elongation Complexes for Dissecting Co-transcriptional RNA Processing Events
Published on: May 13, 2019
Eukaryotic mRNA decapping
1Howard Hughes Medical Institute, Department of Molecular and Cellular Biology, University of Arizona, Tucson, Arizona 85721, USA. jmcoller@u.arizona.edu
Abstract:
Eukaryotic mRNAs are primarily degraded by removal of the 3' poly(A) tail, followed either by cleavage of the 5' cap structure (decapping) and 5'->3' exonucleolytic digestion, or by 3' to 5' degradation. mRNA decapping represents a critical step in turnover because this permits the degradation of the mRNA and is a site of numerous control inputs. Recent analyses suggest decapping of an mRNA consists of four central and related events. These include removal, or inactivation, of the poly(A) tail as an inhibitor of decapping, exit from active translation, assembly of a decapping complex on the mRNA, and sequestration of the mRNA into discrete cytoplasmic foci where decapping can occur. Each of these steps is a demonstrated, or potential, site for the regulation of mRNA decay. We discuss the decapping process in the light of these central properties, which also suggest fundamental aspects of cytoplasmic mRNA physiology that connect decapping, translation, and storage of mRNA.
Insights
Eukaryotic messenger RNA (mRNA) degradation involves decapping, a key step regulated by poly(A) tail removal and translation exit. This process occurs in cytoplasmic foci, influencing mRNA turnover, translation, and storage.
Area of Science:
- Molecular Biology
- Cell Biology
- Biochemistry
Background:
- Eukaryotic mRNA degradation is crucial for gene expression regulation.
- mRNA decay primarily occurs via deadenylation followed by decapping or 3' to 5' degradation.
- Decapping is a critical control point in mRNA turnover.
Purpose of the Study:
- To elucidate the central events and regulatory mechanisms of eukaryotic mRNA decapping.
- To connect mRNA decapping with translation and cytoplasmic mRNA storage.
- To provide a comprehensive overview of mRNA decay pathways.
Main Methods:
- Literature review and synthesis of recent analyses on mRNA decapping.
- Analysis of regulatory inputs at different stages of the decapping process.
- Discussion of the interplay between decapping, translation, and mRNA localization.
Main Results:
- mRNA decapping involves four key events: poly(A) tail inactivation, exit from translation, decapping complex assembly, and sequestration into cytoplasmic foci.
- Each of these events represents a potential site for regulating mRNA decay.
- These processes are intrinsically linked to mRNA translation and storage.
Conclusions:
- Decapping is a highly regulated step central to mRNA turnover in eukaryotes.
- Understanding decapping provides insights into the dynamic regulation of gene expression.
- The interplay between decapping, translation, and mRNA storage is fundamental to cytoplasmic mRNA physiology.
More Related Videos
Related Concept Videos
Pre-mRNA Processing: Modification of pre-mRNA Ends
Once about 20-40 ribonucleotides have been joined together by RNA polymerase, a group of enzymes adds a cap to the 5' end of the growing transcript. In this process, a 5' phosphate is replaced by modified guanosine that has a methyl group attached (7-methyl guanosine). This 5' cap helps the cell...
pre-mRNA Processing
Once about 20-40 ribonucleotides have been joined together by RNA polymerase, a group of enzymes adds a “cap” to the 5’ end of the growing transcript. In this process, a 5’ phosphate is replaced by modified guanosine that has a methyl group attached to it (7-Methyl guanosine). This 5’ cap helps the...
Pre-mRNA Processing
Once about 20-40 ribonucleotides have been joined together by RNA polymerase, a group of enzymes adds a “cap” to the 5’ end of the growing transcript. In this process, a 5’ phosphate is replaced by modified guanosine that has a methyl group attached to it (7-Methyl guanosine). This 5’ cap helps the...
mRNA Stability and Gene Expression
Cis-acting Elements involved in mRNA stability
mRNA Stability and Gene Expression
Cis-acting Elements involved in mRNA stability
Nonsense-mediated mRNA Decay
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...

