Bottom-up excitable models of phytoplankton blooms
Related Experiment Video
Updated: Aug 23, 2026

Measuring Photophysiology of Attached Stage of Colacium sp. by a Cuvette-Type Fast Repetition Rate Fluorometer
Published on: November 12, 2021
Amit Huppert1, Ronen Olinky, Lewi Stone
1Biomathematics Unit, Department of Zoology, Tel Aviv University, Ramat-Aviv, Tel Aviv 69978, Israel. ahuppert@whoi.edu
Abstract:
A simple nutrient-phytoplankton model is used to explore the dynamics of phytoplankton blooms. The model exhibits excitable behaviour in the sense that a large scale outbreak can only be triggered when a critical nutrient threshold is exceeded. The model takes into account several features often neglected but whose combined effect proves very important: (i) rapid nutrient recycling associated with the microbial loop and patch formation; (ii) self-shading; and (iii) a bottom-up approach, whereby nutrient levels are responsible for both the triggering and the demise of the bloom. Although the literature is replete with studies of 'top-down' models in which zooplankton grazing control the triggering and demise of the bloom, bottom-up models are nevertheless appropriate in many circumstances. We provide a full mathematical investigation of the effects of these three different features in an excitable system framework.
Related Concept Videos
Freshwater Microbial Ecology
Primary Production
Marine Microbial Ecology
Channel Rhodopsins
Rhodopsins belong to the family of cell surface proteins called G-protein coupled receptors,...
Oxygenic Photosynthesis
Pharmacodynamic Models: Linear Concentration–Effect Model

