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Updated: Aug 23, 2026

Molecular Evolution of the Tre Recombinase
Published on: May 29, 2008
Analytical study of the effect of recombination on evolution via DNA shuffling
Weiqun Peng1, Herbert Levine, Terence Hwa
1Center for Theoretical Biological Physics, University of California San Diego, 9500 Gilman Drive, La Jolla, California 92093, USA.
Abstract:
DNA shuffling is an evolutionary protocol wherein cycles of selection, recombination, mutation, and amplification are employed to evolve proteins and DNA sequences. Experiments have shown its superiority to traditional protocols which do not employ recombination. Motivated by DNA shuffling, we investigate a multilocus evolutionary model that incorporates selection, recombination, and point mutations. Due to simplicity of the model, for the case of an infinite population we can obtain a full analytical treatment of both its dynamical and equilibrium properties, and study the benefit of recombination explicitly and quantitatively. We also briefly discuss finite-population size corrections.
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