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Updated: Aug 23, 2026

Characterization of a Pathogenic Escherichia coli Strain Derived from Oreochromis spp. Farms Using Whole-Genome Sequencing
Published on: December 23, 2022
Characterization of florfenicol resistance among calf pathogenic Escherichia coli
Xiangdang Du1, Chun Xia, Jianzhong Shen
1Department of Pharmacology and Toxicology, College of Veterinary Medicine, China Agricultural University, Beijing 100094, PR China.
Abstract:
Three floR genes were cloned from calf pathogenic Escherichia coli strains, and the efflux-mediated accumulation of florfenicol in the floR gene-JM109 E. coli system was determined by HPLC. The floR genes resulted in a 1356-bp fragment covering the ORF in region 66-1280 coding for 404 amino acids. The common motifs of 12-transmembrane segments efflux pumps family were conserved in the deduced floR amino acid sequences. HPLC results indicated a significant difference in florfenicol accumulation between florfenicol-resistant strains and the susceptible strains, which was almost reversed by the addition of a proton motive force blocker. These results suggest that the florfenicol resistance mediated by the floR gene involves active efflux of florfenicol.
Insights
The floR gene in calf E. coli confers florfenicol resistance by actively pumping the antibiotic out of the cell. This efflux mechanism was confirmed using high-performance liquid chromatography (HPLC) and proton motive force blockers.
Area of Science:
- Veterinary Microbiology
- Molecular Biology
- Antimicrobial Resistance
Background:
- Florfenicol is a crucial antibiotic used in veterinary medicine.
- Antimicrobial resistance in pathogenic bacteria like Escherichia coli poses a significant threat to animal health.
- The floR gene has been implicated in florfenicol resistance, but its precise mechanism requires further elucidation.
Purpose of the Study:
- To clone and characterize the floR gene from calf pathogenic Escherichia coli.
- To investigate the role of the floR gene in florfenicol accumulation and efflux in E. coli.
- To determine if florfenicol resistance mediated by floR involves an active efflux mechanism.
Main Methods:
- Cloning of three floR genes from calf pathogenic E. coli strains.
- Construction of a floR gene-JM109 E. coli expression system.
- Quantification of florfenicol accumulation using high-performance liquid chromatography (HPLC).
- Assessment of florfenicol accumulation in the presence and absence of a proton motive force blocker.
Main Results:
- The floR gene yielded a 1356-bp fragment encoding 404 amino acids, with conserved motifs of 12-transmembrane efflux pumps.
- HPLC analysis revealed significantly lower florfenicol accumulation in floR-expressing resistant strains compared to susceptible strains.
- Inhibition of proton motive force with a blocker nearly reversed the observed difference in florfenicol accumulation.
Conclusions:
- The floR gene confers florfenicol resistance in calf pathogenic E. coli.
- Florfenicol resistance mediated by the floR gene is primarily due to active efflux of the antibiotic.
- Understanding this efflux mechanism is critical for managing florfenicol resistance in veterinary settings.
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