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Multi-locus Variable-number Tandem-repeat Analysis of the Fish-pathogenic Bacterium Yersinia ruckeri by Multiplex PCR and Capillary Electrophoresis
Published on: June 17, 2019
Identification of invasive Yersinia species using oligonucleotide probes
1Division of Microbiology, Food and Drug Administration, Washington, DC 20204.
Abstract:
Oligonucleotide probes directed to the inv and ail invasion genes of Yersinia species were used to analyse yersiniae and non-yersiniae isolates by colony hybridization. The INV-3 probe, targeted to the inv gene of Yersinia pseudotuberculosis, hybridized with all 48 HeLa cell-invasive Y. pseudotuberculosis isolates examined; the PF-13 probe, specific for the ail gene of Yersinia enterocolitica, identified all invasive strains (36 of 52) of Y. enterocolitica tested. Neither probe hybridized with non-yersinia isolates or other Yersinia species. Southern analyses of restriction enzyme-digested genomic DNA confirmed the specificity of both probes. INV-3 hybridized with a 4.5 kilobase (kb) Bam HI fragment known to carry the inv gene in Y. pseudotuberculosis. PF-13 was specific for a 1.2 kb Cla I-Ava I fragment in Y. enterocolitica that carried the ail locus. Reactivity with either probe correlated closely with the ability of Y. pseudotuberculosis and Y. enterocolitica isolates to invade HeLa cells.
Insights
Specific oligonucleotide probes accurately identified invasive Yersinia species. The INV-3 probe detected the inv gene in Yersinia pseudotuberculosis, while the PF-13 probe identified the ail gene in Yersinia enterocolitica.
Area of Science:
- Microbiology
- Molecular Biology
- Genetics
Background:
- Yersinia species are significant human pathogens.
- Invasion genes like inv and ail are crucial for Yersinia pathogenicity.
- Accurate identification of invasive strains is vital for clinical and epidemiological purposes.
Purpose of the Study:
- To develop and validate specific oligonucleotide probes for detecting invasion genes in Yersinia species.
- To assess the correlation between the presence of inv and ail genes and the invasive capabilities of Yersinia isolates.
- To differentiate between pathogenic Yersinia species and other bacteria.
Main Methods:
- Colony hybridization using specific oligonucleotide probes (INV-3 and PF-13).
- Southern blot analysis of genomic DNA digested with restriction enzymes.
- Testing probe specificity against Yersinia and non-Yersinia isolates.
- Correlation of probe reactivity with HeLa cell invasion assays.
Main Results:
- The INV-3 probe specifically hybridized with all invasive Yersinia pseudotuberculosis isolates (48/48) targeting the inv gene.
- The PF-13 probe specifically identified invasive Yersinia enterocolitica strains (36/52) by targeting the ail gene.
- Neither probe showed cross-reactivity with non-Yersinia species or non-invasive Yersinia strains.
- Southern analyses confirmed probe specificity to known gene fragments (inv: 4.5 kb Bam HI; ail: 1.2 kb Cla I-Ava I).
- Probe reactivity strongly correlated with the ability of isolates to invade HeLa cells.
Conclusions:
- Oligonucleotide probes INV-3 and PF-13 are highly specific and sensitive tools for identifying invasive Yersinia pseudotuberculosis and Yersinia enterocolitica, respectively.
- These probes provide a rapid and reliable method for detecting key virulence genes associated with bacterial invasion.
- The developed probes can aid in the accurate diagnosis and epidemiological surveillance of Yersinia infections.
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