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Updated: Aug 23, 2026

Studying RNA Interactors of Protein Kinase RNA-Activated during the Mammalian Cell Cycle
Published on: March 5, 2019
The Fanconi anemia proteins functionally interact with the protein kinase regulated by RNA (PKR)
Xiaoling Zhang1, June Li, Daniel P Sejas
1Division of Experimental Hematology, Department of Pediatrics, Cincinnati Children's Hospital Medical Center, Ohio 45229, USA.
Abstract:
Protein kinase regulated by RNA (PKR) plays critical roles in cell growth and apoptosis and is implicated as a potential pathogenic factor of Alzheimer's, Parkinson's, and Huntington's diseases. Here we report that this proapoptotic kinase is also involved in Fanconi anemia (FA), a disease characterized by bone marrow (BM) failure and leukemia. We have used a BM extract to show that three FA proteins, FANCA, FANCC, and FANCG, functionally interact with the PKR kinase, which in turn regulates translational control. By using a combined immunoprecipitation and reconstituted kinase assay, in which an active PKR kinase complex was captured from a normal cell extract, we demonstrated functional interactions between the FA proteins and the PKR kinase. In primary human BM cells, mutations in the FANCA, FANCC, and FANCG genes markedly increase the amount of PKR bound to FANCC, and this PKR accumulation is correlated with elevated PKR activation and hypersensitivity of BM progenitor cells to growth repression mediated by the inhibitory cytokines interferon-gamma and tumor necrosis factor-alpha. Specific inhibition of PKR by 2-aminopurine in these FA BM cells attenuates PKR activation and apoptosis induction. In lymphoblasts derived from an FA-C patient, overexpression of a dominant negative mutant PKR (PKRK296R) suppressed PKR activation and apoptosis induced by interferon-gamma and tumor necrosis factor-alpha. Furthermore, by using genetically matched wild-type and PKR-null cells, we demonstrated that forced expression of a patient-derived FA-C mutant (FANCCL554P) augmented double-stranded RNA-induced PKR activation and cell death. Thus, inappropriate activation of PKR as a consequence of certain FA mutations might play a role in bone marrow failure that frequently occurred in FA.
Insights
Fanconi anemia (FA) mutations increase the binding and activation of RNA-dependent protein kinase (PKR). This inappropriate PKR activation contributes to bone marrow failure in FA patients.
Area of Science:
- Molecular Biology
- Cell Biology
- Hematology
Background:
- Protein kinase regulated by RNA (PKR) is crucial for cell growth and apoptosis, and linked to neurodegenerative diseases.
- Fanconi anemia (FA) is a genetic disorder causing bone marrow failure and leukemia.
- The role of PKR in FA pathogenesis was previously unexplored.
Purpose of the Study:
- To investigate the involvement of PKR in Fanconi anemia.
- To elucidate the functional interaction between FA proteins and PKR.
- To determine the contribution of PKR activation to bone marrow failure in FA.
Main Methods:
- Immunoprecipitation and reconstituted kinase assays to study protein interactions.
- Analysis of PKR binding and activation in primary human bone marrow cells from FA patients.
- Inhibition of PKR activity using 2-aminopurine.
- Studies using lymphoblasts and genetically matched wild-type/PKR-null cells with FA mutant expression.
Main Results:
- FANCA, FANCC, and FANCG proteins functionally interact with PKR.
- FA mutations increase PKR binding to FANCC, leading to elevated PKR activation.
- PKR activation in FA cells correlates with hypersensitivity to inhibitory cytokines and increased apoptosis.
- Inhibition of PKR or expression of dominant-negative PKR mutants attenuates FA cell apoptosis.
- Expression of a patient-derived FA-C mutant enhances PKR activation and cell death.
Conclusions:
- Inappropriate PKR activation, driven by specific FA mutations, plays a role in bone marrow failure observed in Fanconi anemia.
- PKR is a novel molecular player in the pathogenesis of Fanconi anemia.
- Targeting PKR may offer a therapeutic strategy for FA-related bone marrow failure.
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