Gene silencing with RNA interference in the human pathogenic fungus Aspergillus fumigatus
Isabelle Mouyna1, Christine Henry, Tamara L Doering
1Institut Pasteur, Unité des Aspergillus, 25 rue du Docteur Roux, 75724 Paris Cedex 15, France. imouyna@pasteur.fr
Abstract:
Aspergillus fumigatus is an opportunistic pathogenic fungus which causes fatal invasive aspergillosis among immunocompromised patients. To obtain a better understanding of the key elements involved in A. fumigatus virulence and to identify possible drug targets, it is necessary to be able to generate gene-deletion strains. Unfortunately, the molecular techniques available do not include a rapid method to disrupt and identify essential genes. RNA interference, a process in which the presence of double-stranded RNA homologous to a gene of interest results in specific degradation of the corresponding message, has been successfully tested on A. fumigatus. We have shown that expression of double stranded RNA corresponding to portions of the ALB1/PKSP and FKS1 genes results in reduced mRNA levels for those genes, with phenotypic consequences similar to that of gene disruption. The two genes could also be subjected to simultaneous interference through expression of chimeric double-stranded RNA. Use of RNA interference in Aspergillus will allow easier examination of the phenotypic consequences of reducing expression of a gene of interest, especially for essential genes.
Insights
RNA interference effectively reduces gene expression in Aspergillus fumigatus, aiding the study of fungal virulence and drug targets. This method allows for easier examination of essential genes, crucial for understanding invasive aspergillosis.
Area of Science:
- Medical Mycology
- Molecular Biology
- Genetics
Background:
- Aspergillus fumigatus causes invasive aspergillosis in immunocompromised individuals.
- Understanding A. fumigatus virulence requires gene disruption, but rapid methods are lacking.
- Essential genes are difficult to study using traditional gene-deletion techniques.
Purpose of the Study:
- To establish RNA interference as a viable method for gene silencing in A. fumigatus.
- To investigate the feasibility of targeting essential genes for virulence studies.
- To identify potential drug targets by understanding gene function.
Main Methods:
- Expression of double-stranded RNA (dsRNA) homologous to specific A. fumigatus genes (ALB1/PKSP and FKS1).
- Assessment of mRNA levels following dsRNA expression.
- Evaluation of phenotypic changes resulting from reduced gene expression.
- Testing simultaneous gene interference using chimeric dsRNA.
Main Results:
- Expression of dsRNA targeting ALB1/PKSP and FKS1 led to reduced mRNA levels for these genes.
- Phenotypic consequences observed were similar to gene disruption.
- Simultaneous interference of both genes was achieved using chimeric dsRNA.
Conclusions:
- RNA interference is a powerful tool for studying gene function in A. fumigatus.
- This technique facilitates the examination of essential genes, crucial for virulence.
- RNA interference offers a rapid and effective approach for identifying drug targets in fungal pathogens.
Related Concept Videos
Experimental RNAi
RNA Interference
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...
RNA Interference
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...
siRNA - Small Interfering RNAs
In the cytoplasm, siRNA is processed from a double-stranded RNA, which comes from either endogenous DNA transcription or exogenous sources like a virus. This double-stranded RNA is then cleaved by the ATP-dependent...
Gene Regulation in Microbial Communities: Quorum Sensing
MicroRNAs

