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Updated: Aug 9, 2026

From Constructs to Crystals – Towards Structure Determination of β-barrel Outer Membrane Proteins
Published on: July 4, 2016
Structure and transport mechanism of the bacterial oxalate transporter OxlT
Teruhisa Hirai1, Sriram Subramaniam
1Laboratory of Cell Biology, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, Maryland 20892, USA.
Abstract:
Membrane proteins that belong to the major facilitator superfamily (MFS) are found in organisms across the evolutionary spectrum and mediate the transport of a variety of substrates ranging from small metabolites to neurotransmitters. The oxalate transporter (OxlT) is a representative MFS protein, and exchanges formate for oxalate across the cytoplasmic membrane of the organism Oxalobacter formigenes. Here, we present a structural model for the protein conformational changes that occur during oxalate transport by combining a three-dimensional map of the oxalate-bound, "closed" state of OxlT at 6.5 A determined by cryo-electron microscopy with a model of the "open" state of OxlT based on the atomic structures of the related transporters, glycerol-3-phosphate transporter (GlpT) and lactose permease (LacY). We demonstrate that the principal structural change associated with substrate transport is a concerted rocking movement of the two structurally similar halves of the protein relative to each other. Our structural model places two positively charged residues, Arg-272 and Lys-355 in the central cavity, suggesting that electrostatic interactions between these residues and the oxalate anion is a key step in generating the conformational change between the open and closed states of the transporter.
Insights
The oxalate transporter (OxlT) undergoes a rocking motion between open and closed states to transport oxalate. Positively charged residues in the central cavity are key to this conformational change.
Area of Science:
- Biochemistry
- Structural Biology
- Molecular Biology
Background:
- Major facilitator superfamily (MFS) proteins transport diverse substrates across cell membranes.
- The oxalate transporter (OxlT) from Oxalobacter formigenes exchanges formate for oxalate.
Purpose of the Study:
- To elucidate the conformational changes of OxlT during oxalate transport.
- To develop a structural model for OxlT-mediated transport.
Main Methods:
- Cryo-electron microscopy (cryo-EM) to determine the 3D structure of oxalate-bound OxlT.
- Modeling the open state using structures of related MFS transporters (GlpT, LacY).
Main Results:
- A structural model shows OxlT undergoes a rocking motion between two halves for transport.
- Two positively charged residues (Arg-272, Lys-355) are identified in the central cavity.
- Electrostatic interactions with oxalate likely drive the conformational change.
Conclusions:
- OxlT functions via a concerted rocking mechanism.
- Electrostatic interactions involving Arg-272 and Lys-355 are crucial for oxalate binding and transport.
- This study provides insights into MFS transporter mechanisms.
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