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Engineering Artificial Factors to Specifically Manipulate Alternative Splicing in Human Cells
Published on: April 26, 2017
Alternative splicing and mutation status of CHEK2 in stage III breast cancer
Vidar Staalesen1, Jacob Falck, Stephanie Geisler
1Department of Molecular Biology, University of Bergen, Bergen, Norway.
Abstract:
The DNA damage checkpoint kinase, CHK2, promotes growth arrest or apoptosis through phosphorylating targets such as Cdc25A, Cdc25C, BRCA1, and p53. Both germline and somatic loss-of-function CHEK2 mutations occur in human tumours, the former linked to the Li-Fraumeni syndrome, and the latter found in diverse types of sporadic malignancies. Here we examined the status of CHK2 by genetic and immunohistochemical analyses in 53 breast carcinomas previously characterized for TP53 status. We identified two CHEK2 mutants, 470T>C (Ile157Thr), and a novel mutation, 1368insA leading to a premature stop codon in exon 13. The truncated protein encoded by CHEK2 carrying the 1368insA was stable yet mislocalized to the cytoplasm in tumour sections and when ectopically expressed in cultured cells. Unexpectedly, we found CHEK2 to be subject to extensive alternative splicing, with some 90 splice variants detected in our tumour series. While all cancers expressed normal-length CHEK2 mRNA together with the spliced transcripts, we demonstrate and/or predict some of these splice variants to lack CHK2 function and/or localize aberrantly. We conclude that cytoplasmic sequestration may represent a novel mechanism to disable CHK2, and propose to further explore the significance of the complex splicing patterns of this tumour suppressor gene in oncogenesis.
Insights
The CHK2 gene, crucial for DNA repair, shows mutations and extensive alternative splicing in breast cancers. Aberrant splicing and cytoplasmic mislocalization of CHK2 protein may disable its tumor suppressor function.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- The CHK2 gene encodes a DNA damage checkpoint kinase involved in cell cycle arrest and apoptosis.
- Loss-of-function mutations in CHEK2 are implicated in human tumors, including Li-Fraumeni syndrome and sporadic cancers.
Purpose of the Study:
- To investigate the status of CHK2, including mutations and alternative splicing, in breast carcinomas.
- To explore potential mechanisms of CHK2 inactivation in oncogenesis.
Main Methods:
- Genetic analysis of CHEK2 mutations.
- Immunohistochemical analysis of CHK2 protein localization.
- Analysis of CHEK2 alternative splicing patterns in tumor samples.
Main Results:
- Identified two CHEK2 mutations: 470T>C (Ile157Thr) and a novel 1368insA leading to a premature stop codon.
- The truncated CHK2 protein was found to be mislocalized to the cytoplasm.
- Detected approximately 90 alternative splice variants of CHEK2, some predicted to be non-functional or aberrantly localized.
Conclusions:
- Cytoplasmic sequestration of CHK2 protein represents a potential novel mechanism for its inactivation.
- Complex alternative splicing patterns of CHEK2 may play a significant role in breast cancer development.
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