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Updated: Aug 1, 2026

Genome-wide Protein-protein Interaction Screening by Protein-fragment Complementation Assay (PCA) in Living Cells
Published on: March 3, 2015
Structural delineation of the calcineurin-NFAT interaction and its parallels to PP1 targeting interactions
Huiming Li1, Anjana Rao, Patrick G Hogan
1Department of Pathology, Harvard Medical School, 200 Longwood Avenue, Boston, MA 02115, USA.
Abstract:
Calcineurin is a phosphoprotein phosphatase that channels intracellular Ca signals into multiple biological pathways. Calcineurin is known to interact directly with its substrate nuclear factor of activated T cells (NFAT or NFATc), with other substrates, and with several targeting and scaffold proteins including AKAP79 and Cabin1/cain. The calcineurin-NFAT interaction depends on recognition of a PxIxIT sequence motif present in NFAT-family proteins and in certain other calcineurin-interacting proteins. Here, we define the structural basis for the interaction of calcineurin with NFAT and with other proteins possessing the PxIxIT motif. The calcineurin-PxIxIT contact has a direct parallel in the contact of protein phosphatase 1 with its regulatory proteins, suggesting that the evolution of these related phosphatases involved local remodelling of an ancestral docking site.
Insights
Calcineurin, a key enzyme in calcium signaling, interacts with nuclear factor of activated T cells (NFAT) via a specific motif. This study reveals the structural basis of this interaction, offering insights into phosphatase evolution.
Area of Science:
- Biochemistry
- Molecular Biology
- Cell Signaling
Background:
- Calcineurin is a crucial phosphoprotein phosphatase mediating intracellular calcium (Ca2+) signals.
- It interacts with substrates like nuclear factor of activated T cells (NFAT) and regulatory proteins (e.g., AKAP79, Cabin1).
- The PxIxIT motif is essential for calcineurin-NFAT binding.
Purpose of the Study:
- To elucidate the structural underpinnings of calcineurin's interaction with NFAT.
- To define the structural basis for calcineurin binding to other proteins containing the PxIxIT motif.
- To compare the calcineurin-PxIxIT interaction with related phosphatase interactions.
Main Methods:
- Structural biology techniques (likely X-ray crystallography or cryo-EM) were used to determine the complex structures.
- Biochemical assays may have been employed to validate binding interactions.
- Comparative analysis with known phosphatase structures was performed.
Main Results:
- The precise structural details of the calcineurin-NFAT complex were defined.
- The interaction interface for the PxIxIT motif in other calcineurin-binding proteins was characterized.
- A structural homology was identified between the calcineurin-PxIxIT interaction and that of protein phosphatase 1.
Conclusions:
- The study provides a detailed structural map of calcineurin's substrate and regulatory protein interactions.
- The findings highlight the conserved nature of the PxIxIT binding mechanism across different phosphatases.
- This research suggests evolutionary remodeling of an ancestral docking site in related phosphatases.
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