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Isolation of Translating Ribosomes Containing Peptidyl-tRNAs for Functional and Structural Analyses
Published on: February 25, 2011
Macrolide resistance from the ribosome perspective
F Franceschi1, Z Kanyo, E C Sherer
1Rib-X Pharmaceuticals, Inc., 300 George Street, Suite 301, New Haven, CT 06511, USA.
Abstract:
Macrolides are important antibiotics used in treatment of respiratory tract infections in humans. Although some of these compounds have been in use for 50 years, it has not been until the last few years that their mechanism of action and the nature of ribosomal-based resistance could be more fully understood. With the advent of robust crystals of ribosomal 50S subunits, and structural resolution of macrolides and ketolides complexed to either Haloarcula marismortui or Deinococcus radiodurans 50S, the ability to dissect the binding modes and understand resistance at the level of the ribosome became possible. This review article compares the binding features of 14-, 15-, and 16-membered macrolides to that of ketolides telithromycin and ABT-773 as revealed at the atomistic level. Attempts to understand how modifications to 23S rRNA and/or mutations in ribosomal proteins L4 and L22 that have been found to confer resistance in Streptococcus pneumoniae, Streptococcus pyogenes, and Haemophilus influenzae are told from the perspective of the ribosome.
Insights
Macrolide antibiotics fight respiratory infections. Recent structural studies reveal how these drugs bind to bacterial ribosomes and how resistance develops at the molecular level.
Area of Science:
- Molecular Biology
- Microbiology
- Pharmacology
Background:
- Macrolides are crucial antibiotics for treating human respiratory tract infections.
- Understanding their mechanism of action and resistance is vital, despite decades of use.
Purpose of the Study:
- To compare the binding modes of various macrolides and ketolides to ribosomal subunits.
- To elucidate the atomic-level details of antibiotic-ribosome interactions and resistance mechanisms.
Main Methods:
- Structural resolution of macrolide and ketolide complexes with ribosomal 50S subunits from Haloarcula marismortui and Deinococcus radiodurans.
- Comparative analysis of binding features at the atomic level.
Main Results:
- Detailed comparison of binding characteristics for 14-, 15-, and 16-membered macrolides versus ketolides (telithromycin, ABT-773).
- Insights into how modifications in 23S rRNA and ribosomal proteins L4/L22 confer resistance.
Conclusions:
- Structural biology provides a detailed understanding of macrolide-ribosome interactions.
- This knowledge is key to comprehending and potentially overcoming antibiotic resistance in key pathogens.
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