Potentiality of DNA-dependent protein kinase to phosphorylate Ser46 of human p53

Shingo Komiyama1, Sachiko Taniguchi, Yoshihisa Matsumoto

  • 1Department of Radiation Oncology, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan.

Insights

DNA damage triggers p53 activation. This study reveals two pathways, involving DNA-dependent protein kinase (DNA-PK) and ataxia-telangiectasia mutated (ATM), for ionizing radiation-induced p53 phosphorylation at Ser46, crucial for apoptosis.

Area of Science:

  • Molecular Biology
  • Cellular Biology
  • Biochemistry

Background:

  • DNA damage response pathways are critical for maintaining genomic stability.
  • p53 protein accumulation and activation are key events following DNA damage.
  • Phosphorylation of p53, particularly at Ser46, is implicated in DNA damage-induced apoptosis, but the responsible kinases remain debated, especially following ionizing radiation (IR).

Purpose of the Study:

  • To investigate the kinases responsible for ionizing radiation (IR)-induced phosphorylation of p53 at Serine 46 (Ser46).
  • To elucidate the specific roles of DNA-dependent protein kinase (DNA-PK) and ataxia-telangiectasia mutated (ATM) in this process.

Main Methods:

  • Utilized human glioma cell lines M059K (DNA-PK proficient) and M059J (DNA-PK deficient).
  • Assessed p53 phosphorylation at Ser15, Ser37, and Ser46 following ionizing radiation (IR) exposure.
  • Investigated the direct and indirect phosphorylation capabilities of DNA-PK and ATM on p53 Ser46.

Main Results:

  • DNA-dependent protein kinase (DNA-PK) was shown to phosphorylate p53 at Ser46, in addition to previously identified sites Ser15 and Ser37.
  • IR-induced phosphorylation of p53 Ser46 occurred even in DNA-PK deficient M059J cells, suggesting alternative pathways.
  • Ataxia-telangiectasia mutated (ATM) was essential for IR-induced Ser46 phosphorylation but showed limited direct phosphorylation activity on this site.

Conclusions:

  • IR-induced phosphorylation of p53 Ser46 occurs through at least two distinct pathways.
  • One pathway involves direct phosphorylation by DNA-PK.
  • The second pathway involves indirect phosphorylation mediated by ATM.

Related Concept Videos

Abnormal Proliferation02:23

Abnormal Proliferation

Under normal conditions, most adult cells remain in a non-proliferative state unless stimulated by internal or external factors to replace lost cells. Abnormal cell proliferation is a condition in which the cell's growth exceeds and is uncoordinated with normal cells. In such situations, cell division persists in the same excessive manner even after cessation of the stimuli, leading to persistent tumors. The tumor arises from the damaged cells that replicate to pass the damage to the daughter...
DNA Damage can Stall the Cell Cycle02:36

DNA Damage can Stall the Cell Cycle

In response to DNA damage, cells can pause the cell cycle to assess and repair the breaks. However, the cell must check the DNA at certain critical stages during the cell cycle. If the cell cycle pauses before DNA replication, the cells will contain twice the amount of DNA. On the other hand, if cells arrest after DNA replication but before mitosis, they will contain four times the normal amount of DNA. With a host of specialized proteins at their disposal,cells must use the right protein at...
DNA Damage Can Stall the Cell Cycle02:36

DNA Damage Can Stall the Cell Cycle

In response to DNA damage, cells can pause the cell cycle to assess and repair the breaks. However, the cell must check the DNA at certain critical stages during the cell cycle. If the cell cycle pauses before DNA replication, the cells will contain twice the amount of DNA. On the other hand, if cells arrest after DNA replication but before mitosis, they will contain four times the normal amount of DNA. With a host of specialized proteins at their disposal,cells must use the right protein at...
Covalently Linked Protein Regulators02:04

Covalently Linked Protein Regulators

Proteins can undergo many types of post-translational modifications, often in response to changes in their environment. These modifications play an important role in the function and stability of these proteins. Covalently linked molecules include functional groups, such as methyl, acetyl, and phosphate groups, and also small proteins, such as ubiquitin. There are around 200 different types of covalent regulators that have been identified.
These groups modify specific amino acids in a protein.
PI3K/mTOR/AKT Signaling Pathway01:22

PI3K/mTOR/AKT Signaling Pathway

The mammalian target of rapamycin  (mTOR) is a serine/threonine kinase that regulates growth, proliferation, and cell survival in response to hormones, growth factors, or nutrient availability. This kinase exists in two structurally and functionally distinct forms: mTOR complex 1  (mTORC1) and mTOR complex 2  (mTORC2). The first form (mTORC1) is composed of a rapamycin-sensitive Raptor and proline-rich Akt substrate, PRAS40. In contrast,  mTORC2 consists of a rapamycin-insensitive companion...
Interactions Between Signaling Pathways01:19

Interactions Between Signaling Pathways

Signaling cascades usually lack linearity. Multiple pathways interact and regulate one another, allowing cells to integrate and respond to diverse environmental stimuli.
Convergence and divergence, and cross-talk between signaling pathways
Two distinct signaling pathways can converge on a single functional unit, which may either be a single protein or a complex of proteins. The response is either functionally distinct or synergistic between the two pathways but different from the response...