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Updated: Jul 30, 2026

Study of the DNA Damage Checkpoint using Xenopus Egg Extracts
Published on: November 5, 2012
Mcm2 is a direct substrate of ATM and ATR during DNA damage and DNA replication checkpoint responses
Hae Yong Yoo1, Anna Shevchenko, Andrej Shevchenko
1Division of Biology, 1200 E. California Blvd., California Institute of Technology, Pasadena, CA 91125, USA.
Abstract:
In vertebrates, ATM and ATR are critical regulators of checkpoint responses to damaged and incompletely replicated DNA. These checkpoint responses involve the activation of signaling pathways that inhibit the replication of chromosomes with DNA lesions. In this study, we describe the isolation of a cDNA encoding a full-length version of Xenopus ATM. Using antibodies against the regulatory domain of ATM, we have identified the essential replication protein Mcm2 as an ATM-binding protein in Xenopus egg extracts. Xenopus Mcm2 underwent phosphorylation at Ser(92) in response to the presence of double-stranded DNA breaks or DNA replication blocks in egg extracts. This phosphorylation involved both ATM and ATR, but the relative contribution of each kinase depended upon the checkpoint-inducing DNA signal. Furthermore, both ATM and ATR phosphorylated Mcm2 directly at Ser(92) in cell-free kinase assays. Immunodepletion of both ATM and ATR abrogated the checkpoint response that blocks chromosomal DNA replication in egg extracts containing double-stranded DNA breaks. These experiments indicate that ATM and ATR phosphorylate the functionally critical replication protein Mcm2 during both DNA damage and replication checkpoint responses in Xenopus egg extracts.
Insights
ATM and ATR kinases phosphorylate the Mcm2 replication protein, crucial for DNA damage and replication checkpoints in Xenopus egg extracts. This phosphorylation is essential for blocking DNA replication upon damage.
Area of Science:
- Molecular Biology
- Cell Biology
- Genetics
Background:
- ATM (Ataxia-telangiectasia mutated) and ATR (Ataxia-telangiectasia and Rad3-related) are vital kinases regulating cellular responses to DNA damage and replication stress in vertebrates.
- These kinases activate signaling pathways that halt chromosome replication when DNA lesions are present, ensuring genomic stability.
Purpose of the Study:
- To investigate the role of ATM and ATR in DNA replication checkpoint control in Xenopus egg extracts.
- To identify and characterize ATM-binding proteins involved in these checkpoint responses.
- To elucidate the specific phosphorylation events mediated by ATM and ATR on replication proteins.
Main Methods:
- Isolation of a full-length Xenopus ATM cDNA.
- Identification of Mcm2 as an ATM-binding protein using specific antibodies in Xenopus egg extracts.
- Analysis of Mcm2 phosphorylation at Ser(92) in response to DNA damage and replication blocks.
- Cell-free kinase assays to determine direct phosphorylation of Mcm2 by ATM and ATR.
- Immunodepletion experiments to assess the necessity of ATM and ATR for checkpoint activation.
Main Results:
- Xenopus Mcm2 was identified as an ATM-binding protein.
- Mcm2 phosphorylation at Ser(92) was observed in response to double-stranded DNA breaks and replication blocks.
- Both ATM and ATR kinases directly phosphorylated Mcm2 at Ser(92), with relative contributions varying by DNA signal.
- Depletion of ATM and ATR abolished the DNA replication checkpoint in response to double-stranded DNA breaks.
Conclusions:
- ATM and ATR are essential for the DNA damage and replication checkpoint responses in Xenopus egg extracts.
- The functionally critical replication protein Mcm2 is a direct target of ATM and ATR phosphorylation during these checkpoints.
- Phosphorylation of Mcm2 by ATM and ATR plays a key role in inhibiting chromosomal DNA replication under stress conditions.
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