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A synthesis strategy yielding skeletally diverse small molecules combinatorially
Martin D Burke1, Eric M Berger, Stuart L Schreiber
1Broad Institute of Harvard and MIT, Department of Chemistry and Chemical Biology, Howard Hughes Medical Institute, Harvard University, 12 Oxford Street, Cambridge, Massachusetts 02138, USA.
This study introduces a novel synthesis strategy for efficiently creating diverse molecular skeletons using pre-encoded information in substrates. This approach mimics protein folding to achieve skeletal diversity in diversity-oriented synthesis (DOS).
Area of Science:
- Organic Chemistry
- Synthetic Chemistry
- Medicinal Chemistry
Background:
- Diversity-oriented synthesis (DOS) faces challenges in efficiently generating molecules with varied molecular skeletons.
- Current methods often lack the combinatorial capacity to produce a wide array of distinct molecular architectures.
Purpose of the Study:
- To develop and demonstrate a novel synthesis strategy for efficient generation of molecular skeletal diversity.
- To leverage pre-encoded information in substrates, analogous to protein folding, for combinatorial synthesis.
Main Methods:
- Developed a synthesis strategy using common reaction conditions to transform substrates with distinct 'sigma-elements' (appendages encoding skeletal information).
- Employed a fully encoded, split-pool synthesis approach.
- Generated approximately 1260 unique compounds.
Main Results:
- Successfully transformed similar substrates into products with distinct molecular skeletons under uniform reaction conditions.
- Demonstrated efficient generation of skeletal diversity through combinatorial pre-encoding of information.
- Achieved a synthesis yielding diverse building block, stereochemical, and skeletal elements.
Conclusions:
- The developed strategy efficiently generates molecular skeletal diversity in DOS.
- The approach, inspired by protein folding, offers a powerful method for combinatorial synthesis.
- This method enables the creation of large libraries of structurally distinct small molecules.
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