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Self-organized pattern formation in motor-microtubule mixtures
Sumithra Sankararaman1, Gautam I Menon, P B Sunil Kumar
1The Institute of Mathematical Sciences, CIT Campus, Taramani, Chennai 600 113, India. sumithra@nic.edu
Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics
|November 5, 2004
Summary
We model self-organized patterns in molecular motor and microtubule mixtures. Our findings reveal how confinement and motor density influence pattern formation, including asters and vortices, crucial for understanding nonequilibrium systems.
Area of Science:
- Biophysics
- Soft Matter Physics
- Non-equilibrium Thermodynamics
Background:
- Mixtures of molecular motors and microtubules exhibit complex self-organized patterns in nonequilibrium steady states.
- Experimental studies have observed various configurations like asters, vortices, and disordered states in quasi-two-dimensional systems.
Purpose of the Study:
- To model and understand the formation of stable self-organized patterns in molecular motor-microtubule systems.
- To investigate the influence of confinement and motor density on pattern transitions and stability.
Main Methods:
- Development of a two-dimensional vector field model for microtubule orientation.
- Inclusion of two scalar density fields for molecular motors (bound and free).
- Simulation of pattern transitions and analysis of steady-state motor distributions.
Main Results:
- Model reproduces experimental observations of aster, vortex, and disordered patterns.
- Confinement and parameter variations induce transitions between different states (aster, spiral, vortex).
- A phase map of nonequilibrium steady states is presented, detailing aster, vortex, and mixed configurations.
Conclusions:
- The model provides insights into the stability of various patterns based on motor density and confinement effects.
- Crowding effects are identified as crucial for stabilizing single aster configurations.
- Results offer implications for the design and interpretation of related biological experiments.