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Updated: Aug 21, 2026

Visualization of Bacterial Resistance using Fluorescent Antibiotic Probes
Published on: March 2, 2020
Molecular basis of bacterial resistance to chloramphenicol and florfenicol
Stefan Schwarz1, Corinna Kehrenberg, Benoît Doublet
1Institut für Tierzucht, Bundesforschungsanstalt für Landwirtschaft (FAL), Höltystrasse 10, 31535 Neustadt-Mariensee, Germany. stefan.schwarz@fal.de
Abstract:
Chloramphenicol (Cm) and its fluorinated derivative florfenicol (Ff) represent highly potent inhibitors of bacterial protein biosynthesis. As a consequence of the use of Cm in human and veterinary medicine, bacterial pathogens of various species and genera have developed and/or acquired Cm resistance. Ff is solely used in veterinary medicine and has been introduced into clinical use in the mid-1990s. Of the Cm resistance genes known to date, only a small number also mediates resistance to Ff. In this review, we present an overview of the different mechanisms responsible for resistance to Cm and Ff with particular focus on the two different types of chloramphenicol acetyltransferases (CATs), specific exporters and multidrug transporters. Phylogenetic trees of the different CAT proteins and exporter proteins were constructed on the basis of a multisequence alignment. Moreover, information is provided on the mobile genetic elements carrying Cm or Cm/Ff resistance genes to provide a basis for the understanding of the distribution and the spread of Cm resistance--even in the absence of a selective pressure imposed by the use of Cm or Ff.
Insights
Chloramphenicol (Cm) and florfenicol (Ff) are potent protein synthesis inhibitors. This review details resistance mechanisms, including acetyltransferases and transporters, and their spread via mobile genetic elements.
Area of Science:
- Microbiology
- Molecular Biology
- Genetics
Background:
- Chloramphenicol (Cm) and florfenicol (Ff) are critical antibiotics inhibiting bacterial protein biosynthesis.
- Widespread use of Cm has led to significant bacterial resistance.
- Florfenicol (Ff), a derivative, is used in veterinary medicine, with fewer known cross-resistance mechanisms.
Purpose of the Study:
- To provide a comprehensive overview of resistance mechanisms against Cm and Ff.
- To focus on chloramphenicol acetyltransferases (CATs), efflux pumps, and multidrug transporters.
- To analyze the genetic basis and spread of resistance genes.
Main Methods:
- Review of existing literature on Cm and Ff resistance.
- Construction of phylogenetic trees for CAT and exporter proteins using multisequence alignment.
- Analysis of mobile genetic elements associated with resistance genes.
Main Results:
- Identified key resistance mechanisms including enzymatic inactivation (CATs) and active efflux (transporters).
- Demonstrated that only a subset of Cm resistance genes confer Ff resistance.
- Highlighted the role of mobile genetic elements in the dissemination of both Cm and Cm/Ff resistance.
Conclusions:
- Understanding resistance mechanisms is crucial for effective antibiotic use.
- Phylogenetic analysis provides insights into the evolution of resistance proteins.
- Mobile genetic elements facilitate the spread of resistance, even without direct antibiotic pressure.
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